| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150398341
Identifier: 150398341
GI number: 150398341
Start: 3300006
End: 3300332
Strand: Direct
Name: 150398341
Synonym: Smed_3149
Alternate gene names: NA
Gene position: 3300006-3300332 (Clockwise)
Preceding gene: 150398340
Following gene: 150398342
Centisome position: 87.26
GC content: 57.49
Gene sequence:
>327_bases ATGACCCAACGATTGCCATCAGCCTGGCGGTTGCCGGTTCTGTCGCTTGCGATCGTCCTGGTGGTGATCTTTGGTTTCGG CATCCATGGCCGTATCAACTCGGCCATGCTTTTGGGTGACATGGATCTGTCATCCGATGTCGATGTCACCATCGGGCTGA GTTTTGAGCCGGAACGCTTTCATCTGGAAAAATTTCAGGACACCGGGCGCTATCAGGGCTGGTCCGACGGGCGGGCGCTG ATCCTTTCGGCCGATCCCGAGGCGCTTCGCAAACTGGCGCGAAACTACTGGATCGGGACGATCGAACCCTATGAGGCCCC TGAATGA
Upstream 100 bases:
>100_bases ATATCCCCCGCAATGCGCGACACTGGGATACGATCACAAGTGACCCGGAATTCATCGCATTGCGTGACCGGGTCATGGCA CTCGTCCGGGATCAAAACGG
Downstream 100 bases:
>100_bases CCGATAGCGTTGCCATCCATCTCAGACCGCGCACCCTTTGGATTTCCCGGGCGCAGCGGCGCGGAACGGCTGGTATTCTG GCGGTGCTGCTGCTGTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTQRLPSAWRLPVLSLAIVLVVIFGFGIHGRINSAMLLGDMDLSSDVDVTIGLSFEPERFHLEKFQDTGRYQGWSDGRAL ILSADPEALRKLARNYWIGTIEPYEAPE
Sequences:
>Translated_108_residues MTQRLPSAWRLPVLSLAIVLVVIFGFGIHGRINSAMLLGDMDLSSDVDVTIGLSFEPERFHLEKFQDTGRYQGWSDGRAL ILSADPEALRKLARNYWIGTIEPYEAPE >Mature_107_residues TQRLPSAWRLPVLSLAIVLVVIFGFGIHGRINSAMLLGDMDLSSDVDVTIGLSFEPERFHLEKFQDTGRYQGWSDGRALI LSADPEALRKLARNYWIGTIEPYEAPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12148; Mature: 12017
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQRLPSAWRLPVLSLAIVLVVIFGFGIHGRINSAMLLGDMDLSSDVDVTIGLSFEPERF CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHH HLEKFQDTGRYQGWSDGRALILSADPEALRKLARNYWIGTIEPYEAPE HHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TQRLPSAWRLPVLSLAIVLVVIFGFGIHGRINSAMLLGDMDLSSDVDVTIGLSFEPERF CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHH HLEKFQDTGRYQGWSDGRALILSADPEALRKLARNYWIGTIEPYEAPE HHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA