Click here to switch to the map view.

The map label for this gene is bfr [H]

Identifier: 150398214

GI number: 150398214

Start: 3168076

End: 3168561

Strand: Reverse

Name: bfr [H]

Synonym: Smed_3019

Alternate gene names: 150398214

Gene position: 3168561-3168076 (Counterclockwise)

Preceding gene: 150398215

Following gene: 150398195

Centisome position: 83.78

GC content: 57.41

Gene sequence:

>486_bases
TTGAAAGGCGACGCAAAGGTCATCGAGCAGCTTAACGAAGCGCTCTATCTCGAACTAGGTGCCGTAAACCAGTACTGGCT
GCATTACCGCCTTCTCGAAGATTGGGGCTACACGCTGCTTGCCAAGAAGGAGCGGGCCGAATCGATCGAGGAAATGCATC
ACGCCGACAAGCTCGTTGCGCGAATCCTCTTCCTTGAAGGTCATCCGAACCTGCAGACGGTTGCACCGTTGCGCATCGGG
CAGAACGTCAGGGAAGTGCTGAAGGCCGACCTTGCCGGCGAATACGATGCCCGCACCGCCTACAAGAACTCCCGCGACAT
CTGTCACGCGGCCGGCGATTACGTATCGATGAAGCTCTTCGAGGAACTCCTCGCAGACGAGGAAGGCCATATCGACTTCC
TGGAAACCCAGCTCGACCTGCTCGACAAGATCGGTGATGAGAAATACGGCCAGCTCAACGCCGCTTCCGCCGACGAAGCC
GAGTAA

Upstream 100 bases:

>100_bases
ACCGAACAATATCACGCCCGCCGCGACTCGACGGACGGCGATATATTTGATTTCATGACCCGCCTCAGACAATTCCATGA
AGAAAACCGGAGGGCGGATC

Downstream 100 bases:

>100_bases
GCTCCGGTATCATCAAATCTCAAGGGCGGCCCCTCATCCGGCTGCCGCCACCTTCTCCCCCGTTATACGGGGAGAAGGAA
CCGCCTTGAGGGAAGAAGGT

Product: bacterioferritin

Products: NA

Alternate protein names: BFR [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKGDAKVIEQLNEALYLELGAVNQYWLHYRLLEDWGYTLLAKKERAESIEEMHHADKLVARILFLEGHPNLQTVAPLRIG
QNVREVLKADLAGEYDARTAYKNSRDICHAAGDYVSMKLFEELLADEEGHIDFLETQLDLLDKIGDEKYGQLNAASADEA
E

Sequences:

>Translated_161_residues
MKGDAKVIEQLNEALYLELGAVNQYWLHYRLLEDWGYTLLAKKERAESIEEMHHADKLVARILFLEGHPNLQTVAPLRIG
QNVREVLKADLAGEYDARTAYKNSRDICHAAGDYVSMKLFEELLADEEGHIDFLETQLDLLDKIGDEKYGQLNAASADEA
E
>Mature_161_residues
MKGDAKVIEQLNEALYLELGAVNQYWLHYRLLEDWGYTLLAKKERAESIEEMHHADKLVARILFLEGHPNLQTVAPLRIG
QNVREVLKADLAGEYDARTAYKNSRDICHAAGDYVSMKLFEELLADEEGHIDFLETQLDLLDKIGDEKYGQLNAASADEA
E

Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]

COG id: COG2193

COG function: function code P; Bacterioferritin (cytochrome b1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Escherichia coli, GI1789733, Length=151, Percent_Identity=50.3311258278146, Blast_Score=142, Evalue=9e-36,

Paralogues:

None

Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002024
- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18305; Mature: 18305

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGDAKVIEQLNEALYLELGAVNQYWLHYRLLEDWGYTLLAKKERAESIEEMHHADKLVA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHH
RILFLEGHPNLQTVAPLRIGQNVREVLKADLAGEYDARTAYKNSRDICHAAGDYVSMKLF
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCHHHHHHHH
EELLADEEGHIDFLETQLDLLDKIGDEKYGQLNAASADEAE
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKGDAKVIEQLNEALYLELGAVNQYWLHYRLLEDWGYTLLAKKERAESIEEMHHADKLVA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHH
RILFLEGHPNLQTVAPLRIGQNVREVLKADLAGEYDARTAYKNSRDICHAAGDYVSMKLF
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHCHHHHHHHH
EELLADEEGHIDFLETQLDLLDKIGDEKYGQLNAASADEAE
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7698330; 11756688 [H]