Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150398184

Identifier: 150398184

GI number: 150398184

Start: 3134784

End: 3135440

Strand: Reverse

Name: 150398184

Synonym: Smed_2987

Alternate gene names: NA

Gene position: 3135440-3134784 (Counterclockwise)

Preceding gene: 150398189

Following gene: 150398182

Centisome position: 82.91

GC content: 59.97

Gene sequence:

>657_bases
ATGAAGCGCCTTCGCTTACTCGGTGCCGTTGTGGGCCTCTGCGGACTGGCGGCCGCCCTTTTCATCGCCGCCAGTCCGCC
CAGTGTTCCCGAGGATGTGATCCGATCCTCGGTGATACGCGTGCCGGAATTGATGGAGCGCGCCTGGACACTGCCCGTTG
CCGCGACTTTCCAGTCGAATATCTCATGGCAATCGAACGGATCTCTGTGCGGACCGGCCAGCCTTGCCAACGTGTTCCGT
TCGCTGGGCGAAGAGGAGATCACAGAAAGCGAAGTCCTGGAGGGTACCGGAATGTGCTGGACGGGCTTCTGCATCATGGG
TCTCACGCTGGATGAGCTTGCAACTGTCGCCCGCAGGCACACGGACCGTACGGTATCGCTGGTGCGCGATATCACGGCGG
ACGAGTTCCTGGAGCACATGAAACGCAGCAACGACCCTGGCCGCCGCTATATCGTCAACTTCACTCGCGAGATGATATTC
GGCTCCGGCGTGGGTCACCACTCGCCCATCGCGGGGTATTTGGAAGCCCAAGACCTCGTGCTCGTGCTGGACGTCAATGA
AGACTACAAACCGTGGCTGATCGAGCGTGAGCGCCTGTTTGCCGCCATGGACACGTTCGATGGGAGCAAGAAACGGGGAC
TACTCTTAATCGAGTGA

Upstream 100 bases:

>100_bases
GGTTGAACCTTCCGGACTGCTCACTGCCCTGAAGCGATAGTACTCCCAACGCGACGAAGAAGGAGTATTTTAAGTCGATC
GTGATGGGGGAGCCACGCTG

Downstream 100 bases:

>100_bases
GAGCGCCATCAATTCACTCTGGTGCTACCTCCGGTGCCGCAATAGCAGTTGGTGCCTCGTGGGCGCCGTCTCGCTGCCGC
TCGTTGCGGCTGCCATGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKRLRLLGAVVGLCGLAAALFIAASPPSVPEDVIRSSVIRVPELMERAWTLPVAATFQSNISWQSNGSLCGPASLANVFR
SLGEEEITESEVLEGTGMCWTGFCIMGLTLDELATVARRHTDRTVSLVRDITADEFLEHMKRSNDPGRRYIVNFTREMIF
GSGVGHHSPIAGYLEAQDLVLVLDVNEDYKPWLIERERLFAAMDTFDGSKKRGLLLIE

Sequences:

>Translated_218_residues
MKRLRLLGAVVGLCGLAAALFIAASPPSVPEDVIRSSVIRVPELMERAWTLPVAATFQSNISWQSNGSLCGPASLANVFR
SLGEEEITESEVLEGTGMCWTGFCIMGLTLDELATVARRHTDRTVSLVRDITADEFLEHMKRSNDPGRRYIVNFTREMIF
GSGVGHHSPIAGYLEAQDLVLVLDVNEDYKPWLIERERLFAAMDTFDGSKKRGLLLIE
>Mature_218_residues
MKRLRLLGAVVGLCGLAAALFIAASPPSVPEDVIRSSVIRVPELMERAWTLPVAATFQSNISWQSNGSLCGPASLANVFR
SLGEEEITESEVLEGTGMCWTGFCIMGLTLDELATVARRHTDRTVSLVRDITADEFLEHMKRSNDPGRRYIVNFTREMIF
GSGVGHHSPIAGYLEAQDLVLVLDVNEDYKPWLIERERLFAAMDTFDGSKKRGLLLIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24127; Mature: 24127

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLRLLGAVVGLCGLAAALFIAASPPSVPEDVIRSSVIRVPELMERAWTLPVAATFQSN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
ISWQSNGSLCGPASLANVFRSLGEEEITESEVLEGTGMCWTGFCIMGLTLDELATVARRH
CCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHH
TDRTVSLVRDITADEFLEHMKRSNDPGRRYIVNFTREMIFGSGVGHHSPIAGYLEAQDLV
CHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEE
LVLDVNEDYKPWLIERERLFAAMDTFDGSKKRGLLLIE
EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC
>Mature Secondary Structure
MKRLRLLGAVVGLCGLAAALFIAASPPSVPEDVIRSSVIRVPELMERAWTLPVAATFQSN
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
ISWQSNGSLCGPASLANVFRSLGEEEITESEVLEGTGMCWTGFCIMGLTLDELATVARRH
CCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHH
TDRTVSLVRDITADEFLEHMKRSNDPGRRYIVNFTREMIFGSGVGHHSPIAGYLEAQDLV
CHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEE
LVLDVNEDYKPWLIERERLFAAMDTFDGSKKRGLLLIE
EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA