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The map label for this gene is yciI [H]

Identifier: 150398160

GI number: 150398160

Start: 3109895

End: 3110188

Strand: Reverse

Name: yciI [H]

Synonym: Smed_2963

Alternate gene names: 150398160

Gene position: 3110188-3109895 (Counterclockwise)

Preceding gene: 150398161

Following gene: 150398159

Centisome position: 82.24

GC content: 61.56

Gene sequence:

>294_bases
ATGCTCTTCGCACTGCTCTGCACCGACAAGCCCGGCGCGTTGCAATTGAGGCTCGACACACGACCCGATCACCTCGCCTA
TCTCAACGACCTCAACGCCCGCGGCATTCTGAAAATTGCAGGGCCGTTCCTCGGCGAAGACGGCAAGCCGACCGGAAGTC
TGGTGATCGTCAAGGCCGACACGCTCGAGGCGGCAGCGGCGATCGCGGCGGCTGACCCTTATGCGAAGGCCGGTCTCTTC
GCCCAGGTCGAGATCAAGGCCTATAACTGGGTCTTCAACAATCCGGAGGCTTGA

Upstream 100 bases:

>100_bases
GCCGTAGCGGCCATCGTCGACGGGAAGCTCGATGTCCGCTCGGCTCTCGAACAACTGATGTCCAGACCGATCACCCACGA
ATAATTCTCCAGGAGGATCC

Downstream 100 bases:

>100_bases
GGGGCAATGGCGTTCTGGCTCTACAAATCCGAACCGGCCAAATGGTCATGGCAGATGCAGAAGGATGCCGGCGAGAAGGG
CACTGAATGGACCGGCGTTC

Product: YciI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MLFALLCTDKPGALQLRLDTRPDHLAYLNDLNARGILKIAGPFLGEDGKPTGSLVIVKADTLEAAAAIAAADPYAKAGLF
AQVEIKAYNWVFNNPEA

Sequences:

>Translated_97_residues
MLFALLCTDKPGALQLRLDTRPDHLAYLNDLNARGILKIAGPFLGEDGKPTGSLVIVKADTLEAAAAIAAADPYAKAGLF
AQVEIKAYNWVFNNPEA
>Mature_97_residues
MLFALLCTDKPGALQLRLDTRPDHLAYLNDLNARGILKIAGPFLGEDGKPTGSLVIVKADTLEAAAAIAAADPYAKAGLF
AQVEIKAYNWVFNNPEA

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yciI family [H]

Homologues:

Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=41.8367346938776, Blast_Score=69, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR005545 [H]

Pfam domain/function: PF03795 YCII [H]

EC number: NA

Molecular weight: Translated: 10340; Mature: 10340

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFALLCTDKPGALQLRLDTRPDHLAYLNDLNARGILKIAGPFLGEDGKPTGSLVIVKAD
CEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEC
TLEAAAAIAAADPYAKAGLFAQVEIKAYNWVFNNPEA
CCCCCEEEECCCCCCCCCEEEEEEEEEEEEEECCCCC
>Mature Secondary Structure
MLFALLCTDKPGALQLRLDTRPDHLAYLNDLNARGILKIAGPFLGEDGKPTGSLVIVKAD
CEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEC
TLEAAAAIAAADPYAKAGLFAQVEIKAYNWVFNNPEA
CCCCCEEEECCCCCCCCCEEEEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]