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The map label for this gene is omp19 [H]

Identifier: 150398143

GI number: 150398143

Start: 3094931

End: 3095470

Strand: Reverse

Name: omp19 [H]

Synonym: Smed_2946

Alternate gene names: 150398143

Gene position: 3095470-3094931 (Counterclockwise)

Preceding gene: 150398144

Following gene: 150398142

Centisome position: 81.85

GC content: 68.89

Gene sequence:

>540_bases
ATGCGGGTTTCACATGCGGCGGTCGGGTTGGCGGTTGTACTTGCGCTAGCTGGATGCCAGCGGACGTCCTTTGGCGGTTT
CGGATCTCAGGATGTTCCTCGCTCTCCCGCTCCGCTGCAGGCGCAGCCCGTACCAACCGTATCGGCGGGGCAACTGCCTC
CGCCGGCCGGCGCATCCCAGTTCCCGGCGCCGCCGACGGCAGGCACAGGCGCGCCCGGCGCGCCCGCCGGAACGGAAGTG
GCCGCGGCCACCAATGCGCTCGATGTGACGAAGGAGTCGATGGTCGGCAACTGGCGCGTTTCGAGCGCCGGCAGCTCCTG
CGACATGTTCCTGACGCTCACCAATCTCGGGAGTGGCTCGCGCGGCGGCACGCGCGGCTGCGCCGGCGAGCTGACGACCA
TGGGGTCGTGGGAAGTGGCGGGCAAGCAAGTCGTGCTCAAGGATCGCAGCGGTAATCCGATCGCCCGGCTCTACAAGACG
GCCGATGCGCGCTTCGACGGATCGACCAACGGCGGGCAGCCGGTCAGCCTCAGCCGCTAA

Upstream 100 bases:

>100_bases
CGCGAAATGCCTCGCCTTGATTTGAAAGGTGGTTTTGCTGTAATTCGGCCTATATTATCGCGTTGCATCATTGTTCGCGG
ACAATATCGGGGGTGAAGAT

Downstream 100 bases:

>100_bases
CGACCAAGTCAAGGCCGATCTCGCGGCCGGACAAGAGGCGGAATGCGGCACGGGCGCCTTCCGCCGCCGCGGCCGCCATC
CTCCTTCCCCAATCGGCCAT

Product: outer membrane lipoprotein omp19

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRVSHAAVGLAVVLALAGCQRTSFGGFGSQDVPRSPAPLQAQPVPTVSAGQLPPPAGASQFPAPPTAGTGAPGAPAGTEV
AAATNALDVTKESMVGNWRVSSAGSSCDMFLTLTNLGSGSRGGTRGCAGELTTMGSWEVAGKQVVLKDRSGNPIARLYKT
ADARFDGSTNGGQPVSLSR

Sequences:

>Translated_179_residues
MRVSHAAVGLAVVLALAGCQRTSFGGFGSQDVPRSPAPLQAQPVPTVSAGQLPPPAGASQFPAPPTAGTGAPGAPAGTEV
AAATNALDVTKESMVGNWRVSSAGSSCDMFLTLTNLGSGSRGGTRGCAGELTTMGSWEVAGKQVVLKDRSGNPIARLYKT
ADARFDGSTNGGQPVSLSR
>Mature_179_residues
MRVSHAAVGLAVVLALAGCQRTSFGGFGSQDVPRSPAPLQAQPVPTVSAGQLPPPAGASQFPAPPTAGTGAPGAPAGTEV
AAATNALDVTKESMVGNWRVSSAGSSCDMFLTLTNLGSGSRGGTRGCAGELTTMGSWEVAGKQVVLKDRSGNPIARLYKT
ADARFDGSTNGGQPVSLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp19 lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003086
- InterPro:   IPR021140
- InterPro:   IPR010571
- InterPro:   IPR016085 [H]

Pfam domain/function: PF02974 Inh [H]

EC number: NA

Molecular weight: Translated: 17852; Mature: 17852

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSHAAVGLAVVLALAGCQRTSFGGFGSQDVPRSPAPLQAQPVPTVSAGQLPPPAGASQ
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FPAPPTAGTGAPGAPAGTEVAAATNALDVTKESMVGNWRVSSAGSSCDMFLTLTNLGSGS
CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCCC
RGGTRGCAGELTTMGSWEVAGKQVVLKDRSGNPIARLYKTADARFDGSTNGGQPVSLSR
CCCCCCCCCCEECCCCEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEECCC
>Mature Secondary Structure
MRVSHAAVGLAVVLALAGCQRTSFGGFGSQDVPRSPAPLQAQPVPTVSAGQLPPPAGASQ
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FPAPPTAGTGAPGAPAGTEVAAATNALDVTKESMVGNWRVSSAGSSCDMFLTLTNLGSGS
CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCCC
RGGTRGCAGELTTMGSWEVAGKQVVLKDRSGNPIARLYKTADARFDGSTNGGQPVSLSR
CCCCCCCCCCEECCCCEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]