Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is znuB [C]

Identifier: 150398114

GI number: 150398114

Start: 3061738

End: 3062595

Strand: Direct

Name: znuB [C]

Synonym: Smed_2917

Alternate gene names: 150398114

Gene position: 3061738-3062595 (Clockwise)

Preceding gene: 150398113

Following gene: 150398115

Centisome position: 80.96

GC content: 62.0

Gene sequence:

>858_bases
ATGATGCCATCGCTCGACATGCTCCTTGCGGTCTTCGAGTTCGAGTTCATGCGCAACGCGCTGCTGATCTCGGTTCTGGT
CGCGATCCCCACGGCGATGCTCTCATGCTTCCTGGTGCTCAAGGGCTGGTCGCTGATGGGCGATGCGATATCGCATGCGG
TCTTCCCCGGCATCGTTATCTCCTACATCGCCGGCCTGCCGCTCGCCGTCGGTGCCTTTACCGCAGGCATGTGCTGCGCG
CTTCTGACCGGCTATCTGAAGGAAAACAGCCGCATCAAGCAGGACACGGTGATGGGCGTCGTCTTTTCCGGGATGTTCGG
TCTCGGCCTGGTGCTCTACACCAAGATTCAGAGCGACGTGCATCTCGACCACATCCTCTTCGGCGACATGCTCGGCATCG
GCTGGGGCGACATATTCGAAACCGGCCTCATGGCGCTTCTGGCCGGCGGCATCCTCGGCCTGAAATGGCGCGATCTCCTG
CTGCACGCCTTCGATCCGGCGCATGCCCGCGCCATCGGACTCAAGGTCGGTTGGCTGCACTACGGCCTGCTCGCGATCCT
GTCGCTGACGATCGTTGGCGCGCTGAAGGCGGTCGGCCTTATCCTGGCGATAGCCATGCTGATCGCCCCCGGCGCTATCG
CCTTTCTCGTCACCCGGACATTCGGCGCGATGCTTGCGGTTGCCGTAATGGTCGCCGTCGCCGCTTCTTTTTGCGGCGTC
TACCTGTCCTTCTTCATCGACAGTGCTCCGGCACCCACCATTGTCCTTCTGATGACGGCTATATTCCTTCTCGCCTTCGC
CTATTCCAGCTGGAGGACGGCCCGCGCCGAAGCCGAGCGGACAGGCGTGCTGGAATGA

Upstream 100 bases:

>100_bases
TCGTGCTGCAGACGCTGATCTTCCTGTTCGCCTTCGTGTTCGCCCCCAAACACGGGCTGCTCGCCGCCCGCCGCCGCTCA
ACGGAAGCTCTGGAGACCGC

Downstream 100 bases:

>100_bases
CGTTGCGACCAGCCCCTCGTCAGCCTCTTGGACGCAGGCGCCCTGATCCCTTATGGTGCGCCACTACTGAGGTTTGGAGC
GGTACGCCACAAGCGTGGTC

Product: ABC-3 protein

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MMPSLDMLLAVFEFEFMRNALLISVLVAIPTAMLSCFLVLKGWSLMGDAISHAVFPGIVISYIAGLPLAVGAFTAGMCCA
LLTGYLKENSRIKQDTVMGVVFSGMFGLGLVLYTKIQSDVHLDHILFGDMLGIGWGDIFETGLMALLAGGILGLKWRDLL
LHAFDPAHARAIGLKVGWLHYGLLAILSLTIVGALKAVGLILAIAMLIAPGAIAFLVTRTFGAMLAVAVMVAVAASFCGV
YLSFFIDSAPAPTIVLLMTAIFLLAFAYSSWRTARAEAERTGVLE

Sequences:

>Translated_285_residues
MMPSLDMLLAVFEFEFMRNALLISVLVAIPTAMLSCFLVLKGWSLMGDAISHAVFPGIVISYIAGLPLAVGAFTAGMCCA
LLTGYLKENSRIKQDTVMGVVFSGMFGLGLVLYTKIQSDVHLDHILFGDMLGIGWGDIFETGLMALLAGGILGLKWRDLL
LHAFDPAHARAIGLKVGWLHYGLLAILSLTIVGALKAVGLILAIAMLIAPGAIAFLVTRTFGAMLAVAVMVAVAASFCGV
YLSFFIDSAPAPTIVLLMTAIFLLAFAYSSWRTARAEAERTGVLE
>Mature_285_residues
MMPSLDMLLAVFEFEFMRNALLISVLVAIPTAMLSCFLVLKGWSLMGDAISHAVFPGIVISYIAGLPLAVGAFTAGMCCA
LLTGYLKENSRIKQDTVMGVVFSGMFGLGLVLYTKIQSDVHLDHILFGDMLGIGWGDIFETGLMALLAGGILGLKWRDLL
LHAFDPAHARAIGLKVGWLHYGLLAILSLTIVGALKAVGLILAIAMLIAPGAIAFLVTRTFGAMLAVAVMVAVAASFCGV
YLSFFIDSAPAPTIVLLMTAIFLLAFAYSSWRTARAEAERTGVLE

Specific function: Part of an ATP-driven transport system HI_0359/HI_0360/HI_0361/HI_0362 for iron (Potential) [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=257, Percent_Identity=29.1828793774319, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 30322; Mature: 30322

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]