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The map label for this gene is yedA [H]

Identifier: 150398109

GI number: 150398109

Start: 3057589

End: 3058494

Strand: Direct

Name: yedA [H]

Synonym: Smed_2912

Alternate gene names: 150398109

Gene position: 3057589-3058494 (Clockwise)

Preceding gene: 150398108

Following gene: 150398111

Centisome position: 80.85

GC content: 62.91

Gene sequence:

>906_bases
ATGGACAGGCCGCGTCTCGCGCTCGAACTGCTTTTGCTCGTCGCCCTCGCAACACTCTGGGGCGCCTCGTACACCTTCAT
CAAGATCGGCGTCGAAACCATCCCGCCGGTGACGCTGATTGCCGCACGCACGCTGCTTGCCGGCGCGATCCTTCTGGCAC
TGATTGCATGGCGCGGACTGAAATTGCCGCGGGACAGGGCGACATGGAGAAAGTTCCTGTTCCAGGCCTGCCTCAACAGC
GTCATTCCCTTCACTCTGATCGCCTGGTCGGAGCGCACGATTGATGCCGGCGTGGCGGCCATCCTCAACTCCACGACCCC
GATCTTCGCCTTTCTTCTGACGGCGTTGATCACCCGCCACGAGCCCGTCACCCCGCGCAAGTTCATAGGCGTCCTTGCTG
GCCTCACAGGAATAGGGCTGATTATCGGCCTTGAGGCTTTCCGGGGCATCGGCGATCAGCTCATCCCACAGCTTGCCGTG
GTGCTTGCGACCCTTTGCTATGCCGGCGCGGCCATTTTCGGAAAGAGTTTCAAAGGTCTCGATCCGATGATGCCCGCCTG
CGGATCTCTCCTCGCAGGTGCGGCCCTGCTCATCCCGGCGAGCCTGGTGGTCGATCGGCCCTGGATGCTCGATCCCTCCC
GGGAGTCGCTGATCGCTCTCCTCTGCCTGTCGGTCTTCTCGACAGCGCTCGCCTTCGTCATCTATTTCCGCCTGATCCAT
ACACTCGGCTCGGTCGGCGCGACGGCCCAGGCCTATGTGCGCGTTCCGATCGGCGTTGCCATCGGAGTGGTCTTTCTGGG
GGAAACGCTTTCGACCACCGCGTGGCTCGGCCTCAGCTGCGTCATCGTCGGCGTCGCCGCGATGACGATCCCCTCACGGC
CCGTGATTGCCACCCTCAAAGGGTAA

Upstream 100 bases:

>100_bases
GCCACGGGAGATTGTCACACTTCGATCGGCACCGAAGCATTGCGGCAGCTCCGGGCGGTAGGAATGGTCCGATGACAACG
ATTCACAAGGACACCTCGTC

Downstream 100 bases:

>100_bases
TCGGCTCAATCCTTGCGCTTCCGGCAATAGAGTTCCAGCCGGTGGCGCACAAGATCGTATCCGAGTTCGGCGGCAATTTC
GGCCTGCAGCTGCTCGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MDRPRLALELLLLVALATLWGASYTFIKIGVETIPPVTLIAARTLLAGAILLALIAWRGLKLPRDRATWRKFLFQACLNS
VIPFTLIAWSERTIDAGVAAILNSTTPIFAFLLTALITRHEPVTPRKFIGVLAGLTGIGLIIGLEAFRGIGDQLIPQLAV
VLATLCYAGAAIFGKSFKGLDPMMPACGSLLAGAALLIPASLVVDRPWMLDPSRESLIALLCLSVFSTALAFVIYFRLIH
TLGSVGATAQAYVRVPIGVAIGVVFLGETLSTTAWLGLSCVIVGVAAMTIPSRPVIATLKG

Sequences:

>Translated_301_residues
MDRPRLALELLLLVALATLWGASYTFIKIGVETIPPVTLIAARTLLAGAILLALIAWRGLKLPRDRATWRKFLFQACLNS
VIPFTLIAWSERTIDAGVAAILNSTTPIFAFLLTALITRHEPVTPRKFIGVLAGLTGIGLIIGLEAFRGIGDQLIPQLAV
VLATLCYAGAAIFGKSFKGLDPMMPACGSLLAGAALLIPASLVVDRPWMLDPSRESLIALLCLSVFSTALAFVIYFRLIH
TLGSVGATAQAYVRVPIGVAIGVVFLGETLSTTAWLGLSCVIVGVAAMTIPSRPVIATLKG
>Mature_301_residues
MDRPRLALELLLLVALATLWGASYTFIKIGVETIPPVTLIAARTLLAGAILLALIAWRGLKLPRDRATWRKFLFQACLNS
VIPFTLIAWSERTIDAGVAAILNSTTPIFAFLLTALITRHEPVTPRKFIGVLAGLTGIGLIIGLEAFRGIGDQLIPQLAV
VLATLCYAGAAIFGKSFKGLDPMMPACGSLLAGAALLIPASLVVDRPWMLDPSRESLIALLCLSVFSTALAFVIYFRLIH
TLGSVGATAQAYVRVPIGVAIGVVFLGETLSTTAWLGLSCVIVGVAAMTIPSRPVIATLKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1788269, Length=292, Percent_Identity=29.1095890410959, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31871; Mature: 31871

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRPRLALELLLLVALATLWGASYTFIKIGVETIPPVTLIAARTLLAGAILLALIAWRGL
CCCHHHHHHHHHHHHHHHHHCCCHHEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
KLPRDRATWRKFLFQACLNSVIPFTLIAWSERTIDAGVAAILNSTTPIFAFLLTALITRH
CCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
EPVTPRKFIGVLAGLTGIGLIIGLEAFRGIGDQLIPQLAVVLATLCYAGAAIFGKSFKGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DPMMPACGSLLAGAALLIPASLVVDRPWMLDPSRESLIALLCLSVFSTALAFVIYFRLIH
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGSVGATAQAYVRVPIGVAIGVVFLGETLSTTAWLGLSCVIVGVAAMTIPSRPVIATLK
HHHCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
G
C
>Mature Secondary Structure
MDRPRLALELLLLVALATLWGASYTFIKIGVETIPPVTLIAARTLLAGAILLALIAWRGL
CCCHHHHHHHHHHHHHHHHHCCCHHEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
KLPRDRATWRKFLFQACLNSVIPFTLIAWSERTIDAGVAAILNSTTPIFAFLLTALITRH
CCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
EPVTPRKFIGVLAGLTGIGLIIGLEAFRGIGDQLIPQLAVVLATLCYAGAAIFGKSFKGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DPMMPACGSLLAGAALLIPASLVVDRPWMLDPSRESLIALLCLSVFSTALAFVIYFRLIH
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLGSVGATAQAYVRVPIGVAIGVVFLGETLSTTAWLGLSCVIVGVAAMTIPSRPVIATLK
HHHCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]