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The map label for this gene is ycjP [C]

Identifier: 150398105

GI number: 150398105

Start: 3050997

End: 3051821

Strand: Direct

Name: ycjP [C]

Synonym: Smed_2907

Alternate gene names: 150398105

Gene position: 3050997-3051821 (Clockwise)

Preceding gene: 150398104

Following gene: 150398106

Centisome position: 80.67

GC content: 60.0

Gene sequence:

>825_bases
ATGATGACCAACAAGCAACCACTTTCGCAGCGCCTCTCCTGGCTGGTGCCGACACTCTATATCGTTTTCCTGCTCCTGCC
GATCTACTGGCTCGTCAATATGAGCTTCAAGGAGACGAGCGAGATCCTCAGCACCTTTTCGCTATGGCCGCAGAATCCGA
CGCTCCGGAACTACACGGTGATCTTCACCGATCCTTCCTGGTACAACGGCTACATCAACTCGATAACCTACGTGGTTCTG
AACACCATCATCTCGGTCACGGTGGCGCTGCCGGCCGCCTATGCCTTCTCGCGCTACCGATTTCTCGGCGACAAGCATCT
GTTCTTCTGGTTGCTCACCAACCGGATGGCGCCGCCGGCGGTTTTCGCTCTGCCCTTCTTCCAGCTCTATTCCGCCTTCG
GCCTGATCGACACGCATATCGCTGTGGCCATCGCGCACTGCCTGTTCAACGTGCCCCTTGCCGTCTGGATCCTGGAAGGC
TTCATGTCCGGCGTGCCGAAGGAGATCGACGAGACCGCCTATATCGACGGCTATTCCTTCCCGCGCTTTTTCGTGAAGAT
CTTCGTGCCGCTGATCGCCTCCGGCATCGGCGTCGCGGCCTTTTTCTGCTTCATGTTCTCGTGGGTCGAGCTCCTGATCG
CCCGCACGCTGACGACAACGGATGCCAAGCCGATCGCCGCGACCATGACACGCACGGTCTCGGCCTCCGGGCTCGACTGG
GGCGTGCTGGCCGCCGCCGGCGTGCTGACGATCATCCCGGGCGCGCTCGTCATCTATTTCGTTCGCAACTACATCGCCAA
GGGCTTCGCCCTTGGTCGGGTCTGA

Upstream 100 bases:

>100_bases
CGATCATCTACTTCCTCATCATCCTGCTCTTGTCGTGGATCTTCTACACGGTGATGACCACGAGCGACGCGCAAGGCTGA
GAAAGGCGGGAGGAGACATC

Downstream 100 bases:

>100_bases
AAAGGAGGGTCTGATGGCAGCCATTGCCGCTCGCAACAACCGCTGGCCCGTCGCACTTGCCGCCGTACTCATCGTCTACC
TTGGCGCCGCGGGCCTGCTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MMTNKQPLSQRLSWLVPTLYIVFLLLPIYWLVNMSFKETSEILSTFSLWPQNPTLRNYTVIFTDPSWYNGYINSITYVVL
NTIISVTVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFALPFFQLYSAFGLIDTHIAVAIAHCLFNVPLAVWILEG
FMSGVPKEIDETAYIDGYSFPRFFVKIFVPLIASGIGVAAFFCFMFSWVELLIARTLTTTDAKPIAATMTRTVSASGLDW
GVLAAAGVLTIIPGALVIYFVRNYIAKGFALGRV

Sequences:

>Translated_274_residues
MMTNKQPLSQRLSWLVPTLYIVFLLLPIYWLVNMSFKETSEILSTFSLWPQNPTLRNYTVIFTDPSWYNGYINSITYVVL
NTIISVTVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFALPFFQLYSAFGLIDTHIAVAIAHCLFNVPLAVWILEG
FMSGVPKEIDETAYIDGYSFPRFFVKIFVPLIASGIGVAAFFCFMFSWVELLIARTLTTTDAKPIAATMTRTVSASGLDW
GVLAAAGVLTIIPGALVIYFVRNYIAKGFALGRV
>Mature_274_residues
MMTNKQPLSQRLSWLVPTLYIVFLLLPIYWLVNMSFKETSEILSTFSLWPQNPTLRNYTVIFTDPSWYNGYINSITYVVL
NTIISVTVALPAAYAFSRYRFLGDKHLFFWLLTNRMAPPAVFALPFFQLYSAFGLIDTHIAVAIAHCLFNVPLAVWILEG
FMSGVPKEIDETAYIDGYSFPRFFVKIFVPLIASGIGVAAFFCFMFSWVELLIARTLTTTDAKPIAATMTRTVSASGLDW
GVLAAAGVLTIIPGALVIYFVRNYIAKGFALGRV

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=279, Percent_Identity=28.673835125448, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1790464, Length=297, Percent_Identity=23.2323232323232, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30770; Mature: 30770

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]