| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is fabG [H]
Identifier: 150398099
GI number: 150398099
Start: 3044552
End: 3045322
Strand: Reverse
Name: fabG [H]
Synonym: Smed_2901
Alternate gene names: 150398099
Gene position: 3045322-3044552 (Counterclockwise)
Preceding gene: 150398110
Following gene: 150398098
Centisome position: 80.52
GC content: 63.81
Gene sequence:
>771_bases ATGTATCATCCGGCCTTGTTCAAGGGCATGAACGTGGTGGTTACCGGCGGCGGGAGGGGCATTGGCCTCGAGGTCGCGCG GCAGTTCCTGGATTGCGGTGCCCGTGTTCTGGTGCATCTGGGGCGGACGATCGCATCCGACCGCCCGGAGTTTCTCGATC TTGCAGCGGCAGAGGGCAGGGCATTCCTCACGGCGGCGGATTTCCTTTCGGACGGGGGCGTGGAGAGCCTTGCCGACGCG GTGAGGAGCCGTTTCGACAGCGTCGACGTTCTCGTCAACAATGCCGGCACGATGGTCGGTCGTTTTCCGGCCGGCGAACT CACCGACGACGACTACCGCACTGTCGTGAAGCTCAACCAGACCTCGGTGGTCGAGATGACCCGGACGATGTTACCGCTCC TGCGCAAGGGCACGCACCCGGCGATCGTCAACACCGTCTCCATCTCGGCACGCGCGGGCGGCAGTCCCGGCTCTTCGATC TATTCCGCCACCAAGGCCTTCGTTTCCACCTATTCCAAGGCTCTGGCGCGCGAACTTGCGCCGGAAGGCATCCGCGTCAA CTGCGTCTCGCCCGGCACGATCGCGACGGATTTCCACGAACGCTATTCGACGCCGGAGAAGCTCGAGGCGACGCGTAAGA CGATTCCGCTAGGTCGGCTGGGGATGGCCGAGGATTGCGCGCCAGCCTACCTCTTCCTCGCTTCGCACGCGCTTTCAGGT TACATCACCGGCCAGGTTCTGGAGGTGAACGGTGGGCAGCTCATCGCTTGA
Upstream 100 bases:
>100_bases ACACGTTCGATTTTCATTGCGGCTTACACCCGATATGCGCTGTAATCCTTGCAATCCTTGCGGACGCGCCAGTCGGAACG GTACGGGAGGGCGAAAGAGA
Downstream 100 bases:
>100_bases GCGCGCGTCCGCCCCCCATCCGCCTGCCGGTGCCTTCTCCCCGCCTGCGGGGGTGAGGGGCAAAAACGCGTGCACTGAGT GAGCCGGTCATGATCGACAA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MYHPALFKGMNVVVTGGGRGIGLEVARQFLDCGARVLVHLGRTIASDRPEFLDLAAAEGRAFLTAADFLSDGGVESLADA VRSRFDSVDVLVNNAGTMVGRFPAGELTDDDYRTVVKLNQTSVVEMTRTMLPLLRKGTHPAIVNTVSISARAGGSPGSSI YSATKAFVSTYSKALARELAPEGIRVNCVSPGTIATDFHERYSTPEKLEATRKTIPLGRLGMAEDCAPAYLFLASHALSG YITGQVLEVNGGQLIA
Sequences:
>Translated_256_residues MYHPALFKGMNVVVTGGGRGIGLEVARQFLDCGARVLVHLGRTIASDRPEFLDLAAAEGRAFLTAADFLSDGGVESLADA VRSRFDSVDVLVNNAGTMVGRFPAGELTDDDYRTVVKLNQTSVVEMTRTMLPLLRKGTHPAIVNTVSISARAGGSPGSSI YSATKAFVSTYSKALARELAPEGIRVNCVSPGTIATDFHERYSTPEKLEATRKTIPLGRLGMAEDCAPAYLFLASHALSG YITGQVLEVNGGQLIA >Mature_256_residues MYHPALFKGMNVVVTGGGRGIGLEVARQFLDCGARVLVHLGRTIASDRPEFLDLAAAEGRAFLTAADFLSDGGVESLADA VRSRFDSVDVLVNNAGTMVGRFPAGELTDDDYRTVVKLNQTSVVEMTRTMLPLLRKGTHPAIVNTVSISARAGGSPGSSI YSATKAFVSTYSKALARELAPEGIRVNCVSPGTIATDFHERYSTPEKLEATRKTIPLGRLGMAEDCAPAYLFLASHALSG YITGQVLEVNGGQLIA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=31.3207547169811, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=32.7935222672065, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI59889578, Length=238, Percent_Identity=32.3529411764706, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI10190704, Length=263, Percent_Identity=30.7984790874525, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=34.412955465587, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI15277342, Length=252, Percent_Identity=34.1269841269841, Blast_Score=88, Evalue=7e-18, Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=33.6, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=29.718875502008, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI66933014, Length=179, Percent_Identity=31.2849162011173, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4557649, Length=202, Percent_Identity=28.2178217821782, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=27.1255060728745, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4758504, Length=213, Percent_Identity=29.5774647887324, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI20149619, Length=200, Percent_Identity=29.5, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI150247226, Length=193, Percent_Identity=30.0518134715026, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=33.1983805668016, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=32.6530612244898, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=32.6612903225806, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI87082160, Length=255, Percent_Identity=30.1960784313725, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=31.3253012048193, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=32.2709163346614, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=30.5882352941176, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787820, Length=248, Percent_Identity=29.8387096774194, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=26.6932270916335, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786812, Length=261, Percent_Identity=29.5019157088123, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788459, Length=175, Percent_Identity=31.4285714285714, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI2367365, Length=251, Percent_Identity=29.8804780876494, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560332, Length=256, Percent_Identity=35.546875, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=34.4827586206897, Blast_Score=120, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=33.587786259542, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=33.0798479087452, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=32.4427480916031, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=31.6793893129771, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17559104, Length=254, Percent_Identity=31.1023622047244, Blast_Score=110, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17562908, Length=260, Percent_Identity=31.9230769230769, Blast_Score=110, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=32.5757575757576, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17565030, Length=255, Percent_Identity=34.1176470588235, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71994600, Length=258, Percent_Identity=34.1085271317829, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=34.8, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17555706, Length=241, Percent_Identity=35.6846473029046, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI72000259, Length=259, Percent_Identity=30.5019305019305, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=31.1787072243346, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=32.03125, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=30.7984790874525, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=33.0645161290323, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=30.952380952381, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=30.0380228136882, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=30.0380228136882, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=29.5019157088123, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=31.0344827586207, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=29.3893129770992, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17536651, Length=261, Percent_Identity=30.6513409961686, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536025, Length=260, Percent_Identity=28.4615384615385, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115534694, Length=252, Percent_Identity=26.984126984127, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI72001658, Length=233, Percent_Identity=27.8969957081545, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71982365, Length=206, Percent_Identity=26.2135922330097, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17538482, Length=160, Percent_Identity=32.5, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17561272, Length=235, Percent_Identity=26.8085106382979, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=238, Percent_Identity=27.3109243697479, Blast_Score=86, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6324126, Length=269, Percent_Identity=28.996282527881, Blast_Score=79, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6322861, Length=192, Percent_Identity=30.7291666666667, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322067, Length=237, Percent_Identity=31.2236286919831, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=35.2941176470588, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=32.1285140562249, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=33.4645669291339, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=32.520325203252, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI24644339, Length=259, Percent_Identity=33.976833976834, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24644337, Length=200, Percent_Identity=33, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=31.2, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI221331218, Length=221, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24665243, Length=221, Percent_Identity=30.7692307692308, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI221331216, Length=221, Percent_Identity=30.316742081448, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24665247, Length=221, Percent_Identity=30.316742081448, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574402, Length=202, Percent_Identity=33.6633663366337, Blast_Score=71, Evalue=9e-13, Organism=Drosophila melanogaster, GI24584744, Length=202, Percent_Identity=32.6732673267327, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21358495, Length=195, Percent_Identity=28.2051282051282, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24656154, Length=212, Percent_Identity=29.7169811320755, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI19922628, Length=212, Percent_Identity=29.7169811320755, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27135; Mature: 27135
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHPALFKGMNVVVTGGGRGIGLEVARQFLDCGARVLVHLGRTIASDRPEFLDLAAAEGR CCCCCHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC AFLTAADFLSDGGVESLADAVRSRFDSVDVLVNNAGTMVGRFPAGELTDDDYRTVVKLNQ EEEEHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECC TSVVEMTRTMLPLLRKGTHPAIVNTVSISARAGGSPGSSIYSATKAFVSTYSKALARELA HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PEGIRVNCVSPGTIATDFHERYSTPEKLEATRKTIPLGRLGMAEDCAPAYLFLASHALSG CCCEEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC YITGQVLEVNGGQLIA EEEEEEEEECCCEECC >Mature Secondary Structure MYHPALFKGMNVVVTGGGRGIGLEVARQFLDCGARVLVHLGRTIASDRPEFLDLAAAEGR CCCCCHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC AFLTAADFLSDGGVESLADAVRSRFDSVDVLVNNAGTMVGRFPAGELTDDDYRTVVKLNQ EEEEHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCCEEEEEECC TSVVEMTRTMLPLLRKGTHPAIVNTVSISARAGGSPGSSIYSATKAFVSTYSKALARELA HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PEGIRVNCVSPGTIATDFHERYSTPEKLEATRKTIPLGRLGMAEDCAPAYLFLASHALSG CCCEEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC YITGQVLEVNGGQLIA EEEEEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]