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The map label for this gene is mliC [H]

Identifier: 150398076

GI number: 150398076

Start: 3011926

End: 3012651

Strand: Reverse

Name: mliC [H]

Synonym: Smed_2878

Alternate gene names: 150398076

Gene position: 3012651-3011926 (Counterclockwise)

Preceding gene: 150398078

Following gene: 150398075

Centisome position: 79.66

GC content: 61.71

Gene sequence:

>726_bases
ATGCTGCAAGCCCTGACCGCCGCATCCTGCGCTTGCGTGCTGATAGAACTTGCCTCGATGCGGACGGTTGCCGCCGAAAA
GGTCCCGGAGCAGCTCGTCGGGTCCTGGCTGGCCGAAGACATGGGCGGTCGTGGTGTGATCGACGATCTTCAAACCACCC
TTGAGATCCGCGAAGACGGGACCTATGGCGGCATGGCCGGCTGCAATCATTTTACCGGGGCGTTCAGCCTTTCGGGCGCA
ACGATCTCGTTCGGCTTCGCAGCGGCGACACGCAAGATGTGCGTACCCGCGGCAATGGATCAGGAGCGCAAATTTCTGAA
TGCTCTCGGAGACGAACTGAGTTGGAAAATAGAGGGGAGCAAGCTGACGCTCGCGAGGCCGAACGGCCCGCCTGTCATTC
GCTTGACCTTCATGGATTCCCGGGCCTCGGGCGGTGCCGAACTCAAGCTCCGCATCCCCGGCGCCGACGCCGTCGAGCGG
CAGATCGTCCGCTATCAATGTGCCGGCAAGACGGTCCAGGCGGAGTATATCAATGCCGGTCCCGTTTCGCTCGCGACACT
GGCGATCGAGGGCACCTTCATCGTCGCGTCGAACGTCATTTCCGGATCGGGTGCCAGATATGCCGGCGGGCAGTATGTCT
GGTGGACGAAGGGCGACGAGGCGAGGCTTTTCGATACGATGGAGGGCGAGGAAGACCCGGGAATCCTGTGCAGGAAAACG
GAATAG

Upstream 100 bases:

>100_bases
CCGGCAACAAGGGCGGAGTCATTGCCCTTCTCTAAGAGACAGTGCTCGGGTAAGAATCGATAGCACCGCCTAACGATGAT
TAAACTTAAGGAGTTCCTGG

Downstream 100 bases:

>100_bases
TCTGACGGCTCAGTCGTTTCGCAGGTCAAATCTGACCGCTTTCCATTCCGCCTGACCTATGCTCATCTGGTCCAGTGTTT
GGTACGGCATACTATCGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLQALTAASCACVLIELASMRTVAAEKVPEQLVGSWLAEDMGGRGVIDDLQTTLEIREDGTYGGMAGCNHFTGAFSLSGA
TISFGFAAATRKMCVPAAMDQERKFLNALGDELSWKIEGSKLTLARPNGPPVIRLTFMDSRASGGAELKLRIPGADAVER
QIVRYQCAGKTVQAEYINAGPVSLATLAIEGTFIVASNVISGSGARYAGGQYVWWTKGDEARLFDTMEGEEDPGILCRKT
E

Sequences:

>Translated_241_residues
MLQALTAASCACVLIELASMRTVAAEKVPEQLVGSWLAEDMGGRGVIDDLQTTLEIREDGTYGGMAGCNHFTGAFSLSGA
TISFGFAAATRKMCVPAAMDQERKFLNALGDELSWKIEGSKLTLARPNGPPVIRLTFMDSRASGGAELKLRIPGADAVER
QIVRYQCAGKTVQAEYINAGPVSLATLAIEGTFIVASNVISGSGARYAGGQYVWWTKGDEARLFDTMEGEEDPGILCRKT
E
>Mature_241_residues
MLQALTAASCACVLIELASMRTVAAEKVPEQLVGSWLAEDMGGRGVIDDLQTTLEIREDGTYGGMAGCNHFTGAFSLSGA
TISFGFAAATRKMCVPAAMDQERKFLNALGDELSWKIEGSKLTLARPNGPPVIRLTFMDSRASGGAELKLRIPGADAVER
QIVRYQCAGKTVQAEYINAGPVSLATLAIEGTFIVASNVISGSGARYAGGQYVWWTKGDEARLFDTMEGEEDPGILCRKT
E

Specific function: Specifically inhibits C-type lysozymes [H]

COG id: COG3187

COG function: function code O; Heat shock protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mliC family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018660 [H]

Pfam domain/function: PF09864 DUF2091 [H]

EC number: NA

Molecular weight: Translated: 25681; Mature: 25681

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQALTAASCACVLIELASMRTVAAEKVPEQLVGSWLAEDMGGRGVIDDLQTTLEIREDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEECCC
TYGGMAGCNHFTGAFSLSGATISFGFAAATRKMCVPAAMDQERKFLNALGDELSWKIEGS
CCCCCCCCCCCCCEEEECCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCC
KLTLARPNGPPVIRLTFMDSRASGGAELKLRIPGADAVERQIVRYQCAGKTVQAEYINAG
EEEEECCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCC
PVSLATLAIEGTFIVASNVISGSGARYAGGQYVWWTKGDEARLFDTMEGEEDPGILCRKT
CCEEEEEEEECEEEEEECEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEC
E
C
>Mature Secondary Structure
MLQALTAASCACVLIELASMRTVAAEKVPEQLVGSWLAEDMGGRGVIDDLQTTLEIREDG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEECCC
TYGGMAGCNHFTGAFSLSGATISFGFAAATRKMCVPAAMDQERKFLNALGDELSWKIEGS
CCCCCCCCCCCCCEEEECCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCC
KLTLARPNGPPVIRLTFMDSRASGGAELKLRIPGADAVERQIVRYQCAGKTVQAEYINAG
EEEEECCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCC
PVSLATLAIEGTFIVASNVISGSGARYAGGQYVWWTKGDEARLFDTMEGEEDPGILCRKT
CCEEEEEEEECEEEEEECEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]