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The map label for this gene is 150398070

Identifier: 150398070

GI number: 150398070

Start: 3008298

End: 3008792

Strand: Reverse

Name: 150398070

Synonym: Smed_2872

Alternate gene names: NA

Gene position: 3008792-3008298 (Counterclockwise)

Preceding gene: 150398071

Following gene: 150398069

Centisome position: 79.56

GC content: 61.41

Gene sequence:

>495_bases
ATGAACATAGATAACGATCTGCGCCGGATTGCGCTGCAAGAGCAGCAATTGCAGTTCGAGCGCTTCGATCTCGACACGGC
GTGGAAACTCGGCGTAACGCTTCGCCGCATGGCCGCGGAGCGCAAGCTCGGCTGCGTCATCGACATCACGCTCTTCTCCA
TGCAGGTCTTTTATGCCGCGCTCGACGGGGCGACACCGGACAATCCGAACTGGGTACGCCGCAAGCGCAACACCGTGTTC
CGCCTGTTCAAAAGCAGCTACGCCACGGGCTTGAGCCTCCTCAAGCAGCAGACGAACCTGCAGGCGAAGCTCGGCCTGGC
TGATGCCGAGTTCGCCGCCCATGGCGGCAGCTTCCCGATCGTCGTCAAGGGAACGGGCTGCATAGGTGCAGTGACCGTTT
CCGGCCTGCCGCAGCGAGACGATCACAATCTCGTGGTCGAGGCACTGGCGGAACTCCTCGGCGCGAACCACGACGAATTG
AAACTCGAGAGCTGA

Upstream 100 bases:

>100_bases
GGGGTGCGCGGCGCCGCATGGCTTTGGAAGGAATAGAGAGTGTCGAGCCTCGGCGGGCGCGAGACATCCCATCGTACGGA
TCACGACAAGCGGAGGCATC

Downstream 100 bases:

>100_bases
CGGAAGCGCATAGGGAATGGATATTCATCTCCAGGCAGGTGCGCTCTCGGGATGGCTGACGGAGGCCGCTCTGCCGCTCT
GGCGGCAGAAGGGCTTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNIDNDLRRIALQEQQLQFERFDLDTAWKLGVTLRRMAAERKLGCVIDITLFSMQVFYAALDGATPDNPNWVRRKRNTVF
RLFKSSYATGLSLLKQQTNLQAKLGLADAEFAAHGGSFPIVVKGTGCIGAVTVSGLPQRDDHNLVVEALAELLGANHDEL
KLES

Sequences:

>Translated_164_residues
MNIDNDLRRIALQEQQLQFERFDLDTAWKLGVTLRRMAAERKLGCVIDITLFSMQVFYAALDGATPDNPNWVRRKRNTVF
RLFKSSYATGLSLLKQQTNLQAKLGLADAEFAAHGGSFPIVVKGTGCIGAVTVSGLPQRDDHNLVVEALAELLGANHDEL
KLES
>Mature_164_residues
MNIDNDLRRIALQEQQLQFERFDLDTAWKLGVTLRRMAAERKLGCVIDITLFSMQVFYAALDGATPDNPNWVRRKRNTVF
RLFKSSYATGLSLLKQQTNLQAKLGLADAEFAAHGGSFPIVVKGTGCIGAVTVSGLPQRDDHNLVVEALAELLGANHDEL
KLES

Specific function: Unknown

COG id: COG4702

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0303 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2872_SINMW (A6UDH2)

Other databases:

- EMBL:   CP000738
- RefSeq:   YP_001328537.1
- ProteinModelPortal:   A6UDH2
- STRING:   A6UDH2
- GeneID:   5323748
- GenomeReviews:   CP000738_GR
- KEGG:   smd:Smed_2872
- eggNOG:   COG4702
- HOGENOM:   HBG367719
- OMA:   TNEDALQ
- ProtClustDB:   PRK02487
- BioCyc:   SMED366394:SMED_2872-MONOMER
- HAMAP:   MF_00761
- InterPro:   IPR005624
- InterPro:   IPR010371
- PIRSF:   PIRSF008757

Pfam domain/function: PF03928 DUF336

EC number: NA

Molecular weight: Translated: 18187; Mature: 18187

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDNDLRRIALQEQQLQFERFDLDTAWKLGVTLRRMAAERKLGCVIDITLFSMQVFYAA
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
LDGATPDNPNWVRRKRNTVFRLFKSSYATGLSLLKQQTNLQAKLGLADAEFAAHGGSFPI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHCCCCCEE
VVKGTGCIGAVTVSGLPQRDDHNLVVEALAELLGANHDELKLES
EEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECC
>Mature Secondary Structure
MNIDNDLRRIALQEQQLQFERFDLDTAWKLGVTLRRMAAERKLGCVIDITLFSMQVFYAA
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
LDGATPDNPNWVRRKRNTVFRLFKSSYATGLSLLKQQTNLQAKLGLADAEFAAHGGSFPI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHCCCCCEE
VVKGTGCIGAVTVSGLPQRDDHNLVVEALAELLGANHDELKLES
EEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA