Click here to switch to the map view.

The map label for this gene is 150398060

Identifier: 150398060

GI number: 150398060

Start: 2988713

End: 2988979

Strand: Reverse

Name: 150398060

Synonym: Smed_2862

Alternate gene names: NA

Gene position: 2988979-2988713 (Counterclockwise)

Preceding gene: 150398061

Following gene: 150398059

Centisome position: 79.03

GC content: 59.55

Gene sequence:

>267_bases
GTGAGCGCGTCCGAAGCGCTGCTCTCACTGCCGATGAGACTAATAGGCAGGCCGAAAGCGGACCTTGCATTTGAACTCAG
CCTATCCATACGAAATCTAGAAAAGAATTCTAGAAGGAGTGCCGTTATGGGGCTCAGCCTCAAGACCGAGGAAGCCGACA
GGCTGGCGCGGGAGTTGTCCCGCCTGACTGGCGAGACCATGACCGACGCCATGACCAAAGCCATGCGCGAGCGACTGGAG
CGGCTGCGGGCGGCAGGAGGCGAATAG

Upstream 100 bases:

>100_bases
TTCAAATCCTGCCCCCGCAACCAAATCAAAAACAAACGCCAAGCAAAAAAGCCCCCATACGGGGGCTTTTTGCGCTTCTG
ATCCATCCTCAATCTCGGTA

Downstream 100 bases:

>100_bases
CGACTATGTGGCGCGCATGAAGGCATTCGTGCGTGAATGCGCTGACCGCTATGATCGCCGCCCGGTCACGAAGCGAGAAT
GGGATGAAGCTGACCTGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSASEALLSLPMRLIGRPKADLAFELSLSIRNLEKNSRRSAVMGLSLKTEEADRLARELSRLTGETMTDAMTKAMRERLE
RLRAAGGE

Sequences:

>Translated_88_residues
MSASEALLSLPMRLIGRPKADLAFELSLSIRNLEKNSRRSAVMGLSLKTEEADRLARELSRLTGETMTDAMTKAMRERLE
RLRAAGGE
>Mature_87_residues
SASEALLSLPMRLIGRPKADLAFELSLSIRNLEKNSRRSAVMGLSLKTEEADRLARELSRLTGETMTDAMTKAMRERLER
LRAAGGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9778; Mature: 9646

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASEALLSLPMRLIGRPKADLAFELSLSIRNLEKNSRRSAVMGLSLKTEEADRLARELS
CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RLTGETMTDAMTKAMRERLERLRAAGGE
HHCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SASEALLSLPMRLIGRPKADLAFELSLSIRNLEKNSRRSAVMGLSLKTEEADRLARELS
CHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
RLTGETMTDAMTKAMRERLERLRAAGGE
HHCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA