| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is egsA [H]
Identifier: 150397899
GI number: 150397899
Start: 2808315
End: 2809670
Strand: Reverse
Name: egsA [H]
Synonym: Smed_2701
Alternate gene names: 150397899
Gene position: 2809670-2808315 (Counterclockwise)
Preceding gene: 150397905
Following gene: 150397898
Centisome position: 74.29
GC content: 64.09
Gene sequence:
>1356_bases ATGGAAACGTCAAGGCAGCAGACTATCGCCGCGGATGCGCCGGAAGGGGGCTGGACGACCCTCATCGACGACATCCTCGC CGGCAACTGGGTCAATCCCGAAACGGGTAGCCCGGCAACGGTTCCCTACGAGAGGATCGTCATCGAAGAGAGCCTCGACG GCGCGGAGGCCGATCTCGTCGCCAGCCTCCGTCTCGGGGAGCGCTTTACGGTCGTCGCCGACGAACGCACCTGGGATGCG ATGGGCGGGCGCGTCGCATCGGCTCTGAAAAGCCTGGGTCCGGTCGATACCGTCATTCTCGACCATCCGCACGCCGACAT GGCAGCCGTGAACGATCTCGACGAGAGGCTCGCGAAAGCCGACGCCGTGGTCGCGGTGGGGTCCGGCACAATCAACGATC TCTGCAAATTCGTCACCGGACGTACCAACCGCCGTTACGCAATCTTCGCCACGGCCGGCTCGATGAACGGCTACACGTCC ACGACAGCCTCCATCACCCTGGAAAACGGCCTCAAGGTCTCGCTGCCGTCCCATGCGCCGGCGGGCTTCTTCGTCGATCT GGCGGTCAACGCCGCAGCACCGCGCCATCTTTCTGCTGCGGGTTTCGCCGATTGCCTCGTCCGCTCCGTCGCCCAGATCG ACTGGTGGATGTCGCACCGGCTGATCGGCAGCGTCTATTCGAGCGTGCCCTATATGATTCAGGACGCCGACGAGCGGGCC CTGAATAGCTGTGCGGCCGGTATTGCCCGAGGGAGCATCAGCGCGAACGGTTATCTTCACCGTGTGCTGACGCTTTGCGG CTTGGGTGTTTCCTTCACGGGCATGTCGAACCACGGCTCGATGGGCGAGCATCAGGTCTCCCACTATATCGACTGCTTTG CCGGCGAGGGACATCCGGGCACGCTCCACGGCCAGCAGGTCGGCGTCGCAACGCTCACCATGGCGCGGCTGCAACGCATC TTTCTCGACAGCGACAAGCCGCCGGTCATCGGCCCCACACGGATTGACCCTGCGGACATGGCCCGGCGCATGGGCGATGA CATAGCCGCCCAGTGCTACGCCGAAATCCAGCCGAAGATTTTCGATGAACGATCTGCCGCCGAGATGAATGAAAGGCTCG CCGAGCTCTGGCCTACGCTGCGCCAGGAACTCGAGGCTTTCGCGCTGCCGGTAGCTCAGATGGAGCAGCTCTTGCGGGAT GCCGGCGGCCCGATGACGGCGGCCGAACTCGGCCTGTCGGGCGGTTTCTACCGCGAGGCCGTGCTGCACTGCCGCGAAAT GCGCAACCGTTACACCTTCCTCGATATTGCCGCCGACACGGGCATGCTCGAGGATTTCGTTGCCGGGGAGGCGTAA
Upstream 100 bases:
>100_bases CAGAGGCGGGTGGCATTTGTCAATCATCTCTGGCAAGTGTATTGACATATGCCAACAGGTGTTGTCACATGCTATCCAGC AGTAGAAAACGGACCAGCGA
Downstream 100 bases:
>100_bases GGCGATGCGGGCGGTTGCCGAGATGCCGACCGAAATCGCTGCCCGTATCACGGTGCTTTTCGCCGACATCGACGATACGC TGACCAATGAGGGGCGGCTG
Product: 3-dehydroquinate synthase
Products: NA
Alternate protein names: G1P dehydrogenase; G1PDH; Enantiomeric glycerophosphate synthase; sn-glycerol-1-phosphate dehydrogenase [H]
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues METSRQQTIAADAPEGGWTTLIDDILAGNWVNPETGSPATVPYERIVIEESLDGAEADLVASLRLGERFTVVADERTWDA MGGRVASALKSLGPVDTVILDHPHADMAAVNDLDERLAKADAVVAVGSGTINDLCKFVTGRTNRRYAIFATAGSMNGYTS TTASITLENGLKVSLPSHAPAGFFVDLAVNAAAPRHLSAAGFADCLVRSVAQIDWWMSHRLIGSVYSSVPYMIQDADERA LNSCAAGIARGSISANGYLHRVLTLCGLGVSFTGMSNHGSMGEHQVSHYIDCFAGEGHPGTLHGQQVGVATLTMARLQRI FLDSDKPPVIGPTRIDPADMARRMGDDIAAQCYAEIQPKIFDERSAAEMNERLAELWPTLRQELEAFALPVAQMEQLLRD AGGPMTAAELGLSGGFYREAVLHCREMRNRYTFLDIAADTGMLEDFVAGEA
Sequences:
>Translated_451_residues METSRQQTIAADAPEGGWTTLIDDILAGNWVNPETGSPATVPYERIVIEESLDGAEADLVASLRLGERFTVVADERTWDA MGGRVASALKSLGPVDTVILDHPHADMAAVNDLDERLAKADAVVAVGSGTINDLCKFVTGRTNRRYAIFATAGSMNGYTS TTASITLENGLKVSLPSHAPAGFFVDLAVNAAAPRHLSAAGFADCLVRSVAQIDWWMSHRLIGSVYSSVPYMIQDADERA LNSCAAGIARGSISANGYLHRVLTLCGLGVSFTGMSNHGSMGEHQVSHYIDCFAGEGHPGTLHGQQVGVATLTMARLQRI FLDSDKPPVIGPTRIDPADMARRMGDDIAAQCYAEIQPKIFDERSAAEMNERLAELWPTLRQELEAFALPVAQMEQLLRD AGGPMTAAELGLSGGFYREAVLHCREMRNRYTFLDIAADTGMLEDFVAGEA >Mature_451_residues METSRQQTIAADAPEGGWTTLIDDILAGNWVNPETGSPATVPYERIVIEESLDGAEADLVASLRLGERFTVVADERTWDA MGGRVASALKSLGPVDTVILDHPHADMAAVNDLDERLAKADAVVAVGSGTINDLCKFVTGRTNRRYAIFATAGSMNGYTS TTASITLENGLKVSLPSHAPAGFFVDLAVNAAAPRHLSAAGFADCLVRSVAQIDWWMSHRLIGSVYSSVPYMIQDADERA LNSCAAGIARGSISANGYLHRVLTLCGLGVSFTGMSNHGSMGEHQVSHYIDCFAGEGHPGTLHGQQVGVATLTMARLQRI FLDSDKPPVIGPTRIDPADMARRMGDDIAAQCYAEIQPKIFDERSAAEMNERLAELWPTLRQELEAFALPVAQMEQLLRD AGGPMTAAELGLSGGFYREAVLHCREMRNRYTFLDIAADTGMLEDFVAGEA
Specific function: Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol-1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species [H]
COG id: COG0371
COG function: function code C; Glycerol dehydrogenase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycerol-1-phosphate dehydrogenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002658 - InterPro: IPR023003 [H]
Pfam domain/function: PF01761 DHQ_synthase [H]
EC number: =1.1.1.261 [H]
Molecular weight: Translated: 48417; Mature: 48417
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSRQQTIAADAPEGGWTTLIDDILAGNWVNPETGSPATVPYERIVIEESLDGAEADLV CCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCHHHHH ASLRLGERFTVVADERTWDAMGGRVASALKSLGPVDTVILDHPHADMAAVNDLDERLAKA HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH DAVVAVGSGTINDLCKFVTGRTNRRYAIFATAGSMNGYTSTTASITLENGLKVSLPSHAP CEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEECCCCCC AGFFVDLAVNAAAPRHLSAAGFADCLVRSVAQIDWWMSHRLIGSVYSSVPYMIQDADERA CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHH LNSCAAGIARGSISANGYLHRVLTLCGLGVSFTGMSNHGSMGEHQVSHYIDCFAGEGHPG HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCC TLHGQQVGVATLTMARLQRIFLDSDKPPVIGPTRIDPADMARRMGDDIAAQCYAEIQPKI CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCHH FDERSAAEMNERLAELWPTLRQELEAFALPVAQMEQLLRDAGGPMTAAELGLSGGFYREA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHH VLHCREMRNRYTFLDIAADTGMLEDFVAGEA HHHHHHHHCCCEEEEEECCCCHHHHHHCCCC >Mature Secondary Structure METSRQQTIAADAPEGGWTTLIDDILAGNWVNPETGSPATVPYERIVIEESLDGAEADLV CCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEECCCCCCHHHHH ASLRLGERFTVVADERTWDAMGGRVASALKSLGPVDTVILDHPHADMAAVNDLDERLAKA HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH DAVVAVGSGTINDLCKFVTGRTNRRYAIFATAGSMNGYTSTTASITLENGLKVSLPSHAP CEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEECCCCCC AGFFVDLAVNAAAPRHLSAAGFADCLVRSVAQIDWWMSHRLIGSVYSSVPYMIQDADERA CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHH LNSCAAGIARGSISANGYLHRVLTLCGLGVSFTGMSNHGSMGEHQVSHYIDCFAGEGHPG HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCC TLHGQQVGVATLTMARLQRIFLDSDKPPVIGPTRIDPADMARRMGDDIAAQCYAEIQPKI CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCHH FDERSAAEMNERLAELWPTLRQELEAFALPVAQMEQLLRDAGGPMTAAELGLSGGFYREA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHCCCCCHHHHH VLHCREMRNRYTFLDIAADTGMLEDFVAGEA HHHHHHHHCCCEEEEEECCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA