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The map label for this gene is omp10 [H]

Identifier: 150397887

GI number: 150397887

Start: 2793693

End: 2794061

Strand: Direct

Name: omp10 [H]

Synonym: Smed_2689

Alternate gene names: 150397887

Gene position: 2793693-2794061 (Clockwise)

Preceding gene: 150397886

Following gene: 150397888

Centisome position: 73.87

GC content: 60.7

Gene sequence:

>369_bases
ATGAAGCCATTCGCCATCCTCACCCTCTTGGCATCTGCCGCCGCGCTGGCCTCCTGTCAGTCCCAACCTCGGGAACTCAG
GCAGATGTCTTCAGCGCCGCAGGCAACGGGCGTCGAGGGTTCGTGGGTCGATCCGAACGGCATCGTCTCCACCTTCGCCG
GCGGAACATTTTCGACGCGCACGACCGATACCAACCAGCTTCTCGCCTCCGGCAACTATGTGAACGTCAGCCCTACACTG
GTGGAAATCAACATGACGTCCCTGGTGCGCAATATCCAGTCCAAGGTCAATTGCGCCTTGGCAACGCCATCTCAGCTGAA
CTGCACGACCGACTCTGGCGCCCAGTTCTCGTTGACTCGCCGCGCCTGA

Upstream 100 bases:

>100_bases
GTTCCGGTTCACGGAATTATGCGGTAGAGCGGGGACAGGAAAGTATGAAGCGGTCTTGCGTTTGCATCCCGCTCAAACTC
GTGACGCGGGAGAAACGCCG

Downstream 100 bases:

>100_bases
GGCCGTCACTTCACCGAGCAGCCCCCCGACCGGGGGCTTTTTTCTTTCTGGGGCCGGCTTAACCCTATCCGAAAGTCCGG
CAGCGAGGCATGCGTTTGCG

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKPFAILTLLASAAALASCQSQPRELRQMSSAPQATGVEGSWVDPNGIVSTFAGGTFSTRTTDTNQLLASGNYVNVSPTL
VEINMTSLVRNIQSKVNCALATPSQLNCTTDSGAQFSLTRRA

Sequences:

>Translated_122_residues
MKPFAILTLLASAAALASCQSQPRELRQMSSAPQATGVEGSWVDPNGIVSTFAGGTFSTRTTDTNQLLASGNYVNVSPTL
VEINMTSLVRNIQSKVNCALATPSQLNCTTDSGAQFSLTRRA
>Mature_122_residues
MKPFAILTLLASAAALASCQSQPRELRQMSSAPQATGVEGSWVDPNGIVSTFAGGTFSTRTTDTNQLLASGNYVNVSPTL
VEINMTSLVRNIQSKVNCALATPSQLNCTTDSGAQFSLTRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp10 lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12826; Mature: 12826

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFAILTLLASAAALASCQSQPRELRQMSSAPQATGVEGSWVDPNGIVSTFAGGTFSTR
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
TTDTNQLLASGNYVNVSPTLVEINMTSLVRNIQSKVNCALATPSQLNCTTDSGAQFSLTR
CCCCHHHEECCCEEECCCEEEEEEHHHHHHHHHHHCEEEECCCCCCEECCCCCCEEEEEE
RA
CC
>Mature Secondary Structure
MKPFAILTLLASAAALASCQSQPRELRQMSSAPQATGVEGSWVDPNGIVSTFAGGTFSTR
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
TTDTNQLLASGNYVNVSPTLVEINMTSLVRNIQSKVNCALATPSQLNCTTDSGAQFSLTR
CCCCHHHEECCCEEECCCEEEEEEHHHHHHHHHHHCEEEECCCCCCEECCCCCCEEEEEE
RA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]