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The map label for this gene is yebC [C]

Identifier: 150397839

GI number: 150397839

Start: 2742353

End: 2743099

Strand: Reverse

Name: yebC [C]

Synonym: Smed_2641

Alternate gene names: 150397839

Gene position: 2743099-2742353 (Counterclockwise)

Preceding gene: 150397840

Following gene: 150397837

Centisome position: 72.53

GC content: 61.58

Gene sequence:

>747_bases
ATGGCTGGCCATTCACAGTTCAAGAACATCATGCACCGCAAGGGCCGTCAGGATGCGGTGCGCTCCAAAATGTTTTCCAA
GCTCGCGCGCGAAATCACCGTCGCTGCAAAAGCCGGCCTCCCGGATCCGGCCATGAACCCCCGGCTGCGTCTGGCGATCC
AGAACGCCAAGGCTCAGTCGATGCCGAAGGACAATATCGAGCGTGCGGTCAAGAAGGCTGCGGGCGGCGATGCCGAAACC
TACGAGGAAGTCCGCTATGAGGGTTACGGACCCGCAGGCGTCGCCGTCATCGTCGAGGCGCTGACGGACAACCGCAATCG
CACCGCCTCCAACGTCCGCTCGATTTTCACCAAGGCGGGTGGGGCGCTCGGGGAAACCGGTTCGGTCTCTTTCTCATTCG
ACCGCGTCGGTGAGATCACCTACAAGCTGTCTGTCGGCGACGCCGACACTGTGATGGAGGCGGCGATCGAAGCGGGTGCA
GACGACGTCGAGACGGATGAGGAAGGCCACACCATCACCTGCGGCTTCGAGGATATCGGCGAGGTCTCGAAGGCGCTCGA
AGGCGCTCTCGGCGAAGCCGAGACGGTGAAGGCCGTCTGGAAGCCGCAGAACACCGTGCCGGTGGATGAGGAAAAGGCGC
AGTCGCTGATGAAGCTGATCGACAACCTCGAAGACGACGACGACGTCCAGAACGTCTACTCGAACTTCGAGGTCTCTGAG
GAAGTGCTGGCGAAACTTTCGGCCTGA

Upstream 100 bases:

>100_bases
CCTTTCTCCGCTCCTGAAAACACGCCCCCTGCTGGACTGGAGGCGGCAATGAAACTATAAGGCGCCCGATCTCACCAAAA
TCACGCATGCAGAGGGCGTC

Downstream 100 bases:

>100_bases
TTCTGCGCCTCCGCAAACAGCTTCACCGAACGCAGCCGCGCTTCCATGTCGTAGATCGGCATGGAGACGATCAGTTCATC
GGCCCTGGTGAGGTCGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKAGLPDPAMNPRLRLAIQNAKAQSMPKDNIERAVKKAAGGDAET
YEEVRYEGYGPAGVAVIVEALTDNRNRTASNVRSIFTKAGGALGETGSVSFSFDRVGEITYKLSVGDADTVMEAAIEAGA
DDVETDEEGHTITCGFEDIGEVSKALEGALGEAETVKAVWKPQNTVPVDEEKAQSLMKLIDNLEDDDDVQNVYSNFEVSE
EVLAKLSA

Sequences:

>Translated_248_residues
MAGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKAGLPDPAMNPRLRLAIQNAKAQSMPKDNIERAVKKAAGGDAET
YEEVRYEGYGPAGVAVIVEALTDNRNRTASNVRSIFTKAGGALGETGSVSFSFDRVGEITYKLSVGDADTVMEAAIEAGA
DDVETDEEGHTITCGFEDIGEVSKALEGALGEAETVKAVWKPQNTVPVDEEKAQSLMKLIDNLEDDDDVQNVYSNFEVSE
EVLAKLSA
>Mature_247_residues
AGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKAGLPDPAMNPRLRLAIQNAKAQSMPKDNIERAVKKAAGGDAETY
EEVRYEGYGPAGVAVIVEALTDNRNRTASNVRSIFTKAGGALGETGSVSFSFDRVGEITYKLSVGDADTVMEAAIEAGAD
DVETDEEGHTITCGFEDIGEVSKALEGALGEAETVKAVWKPQNTVPVDEEKAQSLMKLIDNLEDDDDVQNVYSNFEVSEE
VLAKLSA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=33.6032388663968, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=47.5806451612903, Blast_Score=223, Evalue=6e-60,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=42.3076923076923, Blast_Score=162, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.6393442622951, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=34.8484848484849, Blast_Score=120, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=27.8225806451613, Blast_Score=88, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2641_SINMW (A6UCU1)

Other databases:

- EMBL:   CP000738
- RefSeq:   YP_001328306.1
- ProteinModelPortal:   A6UCU1
- SMR:   A6UCU1
- STRING:   A6UCU1
- GeneID:   5323510
- GenomeReviews:   CP000738_GR
- KEGG:   smd:Smed_2641
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   SMED366394:SMED_2641-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26714; Mature: 26583

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKAGLPDPAMNPRLRLAIQNAKAQS
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHC
MPKDNIERAVKKAAGGDAETYEEVRYEGYGPAGVAVIVEALTDNRNRTASNVRSIFTKAG
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GALGETGSVSFSFDRVGEITYKLSVGDADTVMEAAIEAGADDVETDEEGHTITCGFEDIG
CCCCCCCCEEEEHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHH
EVSKALEGALGEAETVKAVWKPQNTVPVDEEKAQSLMKLIDNLEDDDDVQNVYSNFEVSE
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH
EVLAKLSA
HHHHHHCC
>Mature Secondary Structure 
AGHSQFKNIMHRKGRQDAVRSKMFSKLAREITVAAKAGLPDPAMNPRLRLAIQNAKAQS
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHC
MPKDNIERAVKKAAGGDAETYEEVRYEGYGPAGVAVIVEALTDNRNRTASNVRSIFTKAG
CCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GALGETGSVSFSFDRVGEITYKLSVGDADTVMEAAIEAGADDVETDEEGHTITCGFEDIG
CCCCCCCCEEEEHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHH
EVSKALEGALGEAETVKAVWKPQNTVPVDEEKAQSLMKLIDNLEDDDDVQNVYSNFEVSE
HHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH
EVLAKLSA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA