| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397810
Identifier: 150397810
GI number: 150397810
Start: 2707689
End: 2708072
Strand: Reverse
Name: 150397810
Synonym: Smed_2612
Alternate gene names: NA
Gene position: 2708072-2707689 (Counterclockwise)
Preceding gene: 150397813
Following gene: 150397809
Centisome position: 71.61
GC content: 65.62
Gene sequence:
>384_bases ATGACCGCAATTGAGCCTGAAGAACAGGACGACAAGCCGCTTGACCCGGCGATGGAGAATGTCCGTCGCAAGATGGTGCG CCTGCAACTCGTCTCGGCCGCCGTGATGCTGGTGATGCTTATGGCCGTCCTCGGGGCGATTGTCTACAAGCTGACCCGCG CGGACGGGAGCGCCGAGGCGGCGCAGCCGGGGCTGAGCGTGCCGGGGGATGCGCCGATAAGCGCGATTGCAGCGCTGCCG GCGGGCTTTTCCGTGAGCAATGTGGCGCTTTCCGGTTCGCAGATCGTCTTCTACGGCAGCCTACCCGGCGCGGAGCCGCG GGCGATCGTTTTCGACATCAAGGCCGGCCGCATCGTCGCCGACGTCACGGTCAGGACCAACTGA
Upstream 100 bases:
>100_bases ATCGCCCGCTGTCAGGACTTTCCTATTGCCGGGCGCTTGTTTAAAGGGATCGTTCATTCCGTTCCAATTCCGCCGTTTCA ACTCCGATAGAAAGCCGACC
Downstream 100 bases:
>100_bases CGGCATGACGCGGCCTCTCCTTCGCATCGACGATCCGGCGGACCCGCGCATAGCCGGGTTGGTGTCGATCAAAGAGCGCG ATTTGACCGGCCGTCAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTAIEPEEQDDKPLDPAMENVRRKMVRLQLVSAAVMLVMLMAVLGAIVYKLTRADGSAEAAQPGLSVPGDAPISAIAALP AGFSVSNVALSGSQIVFYGSLPGAEPRAIVFDIKAGRIVADVTVRTN
Sequences:
>Translated_127_residues MTAIEPEEQDDKPLDPAMENVRRKMVRLQLVSAAVMLVMLMAVLGAIVYKLTRADGSAEAAQPGLSVPGDAPISAIAALP AGFSVSNVALSGSQIVFYGSLPGAEPRAIVFDIKAGRIVADVTVRTN >Mature_126_residues TAIEPEEQDDKPLDPAMENVRRKMVRLQLVSAAVMLVMLMAVLGAIVYKLTRADGSAEAAQPGLSVPGDAPISAIAALPA GFSVSNVALSGSQIVFYGSLPGAEPRAIVFDIKAGRIVADVTVRTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13249; Mature: 13117
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIEPEEQDDKPLDPAMENVRRKMVRLQLVSAAVMLVMLMAVLGAIVYKLTRADGSAEA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AQPGLSVPGDAPISAIAALPAGFSVSNVALSGSQIVFYGSLPGAEPRAIVFDIKAGRIVA CCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEEECCCEEEE DVTVRTN EEEEECC >Mature Secondary Structure TAIEPEEQDDKPLDPAMENVRRKMVRLQLVSAAVMLVMLMAVLGAIVYKLTRADGSAEA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AQPGLSVPGDAPISAIAALPAGFSVSNVALSGSQIVFYGSLPGAEPRAIVFDIKAGRIVA CCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEEEECCCEEEE DVTVRTN EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA