Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397806

Identifier: 150397806

GI number: 150397806

Start: 2703926

End: 2704588

Strand: Reverse

Name: 150397806

Synonym: Smed_2608

Alternate gene names: NA

Gene position: 2704588-2703926 (Counterclockwise)

Preceding gene: 150397809

Following gene: 150397805

Centisome position: 71.51

GC content: 62.44

Gene sequence:

>663_bases
ATGGCAAAGAATCCGAATCTGACGTTGACGGGACATGATCTGGCCGCGCTGCTGTGCAGCCGTGTCTGCCACGATATCAT
CTCGCCGGTCGGCGCCATCAACAACGGTCTTGAACTCCTCGACGAGGGCGGTGCCGATGCGGATGCCATGGACCTGATAC
GCACCAGTGCGCTCAATGCCTCGGTGCGATTGAAGTTTGCGCGCCTGGCATTCGGTGCGTCCGGCTCCGTCGGGGCGTCG
ATCGACACCGGCGAGGCCGAGAAGGCCGCTAAGGATTTTGCCGCTTCGGAGAAGAAGACCGAGGTCACCTGGAATGGACC
GCGGGCGATCATCGCAAAAAACCGCGTCAAGCTGCTCCTCAACCTTTTCCTGATCGCCTACGGATCGATCCCGCGCGGCG
GCATCATCGACATCACTCTGGAAAACCCGGAATTCGACGCGCTGTTTACCCTTTCGGCGAAGGGCCGGATGATGCGGGTG
CCGCCGAAGCTGGTGGAGCTCATCTCCGGCACGCCGGAGGAGGCGGTCGACGCACATTCGATCCAGCCCTATTACACTGT
TCTCCTGGCGGAAGAGGCCGGCATGGCTATCGACGTCGTCTCGACCGGCGAAGAGATCGTCTTCACAGCGCGCGTCGTCG
CGCCGGAGGCGGCGGACGCCTGA

Upstream 100 bases:

>100_bases
CCCATGTCTGACCGACGACCGTGCGGGAGCTTCATCGGGCTTATGTGTGCCCGGCGCCCCAACAGCCCGTGATCCGGTTT
GCAGCGAGCAAGGAAGAATG

Downstream 100 bases:

>100_bases
AGCTCAAAGCATGACGCGGAAACCTCTGGGAAAGCGCACGCGCCTCCCATAGGGTCCACGTGTTCATTCCCCCTTTCGAT
ACCTTCGGACAGGCACCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAKNPNLTLTGHDLAALLCSRVCHDIISPVGAINNGLELLDEGGADADAMDLIRTSALNASVRLKFARLAFGASGSVGAS
IDTGEAEKAAKDFAASEKKTEVTWNGPRAIIAKNRVKLLLNLFLIAYGSIPRGGIIDITLENPEFDALFTLSAKGRMMRV
PPKLVELISGTPEEAVDAHSIQPYYTVLLAEEAGMAIDVVSTGEEIVFTARVVAPEAADA

Sequences:

>Translated_220_residues
MAKNPNLTLTGHDLAALLCSRVCHDIISPVGAINNGLELLDEGGADADAMDLIRTSALNASVRLKFARLAFGASGSVGAS
IDTGEAEKAAKDFAASEKKTEVTWNGPRAIIAKNRVKLLLNLFLIAYGSIPRGGIIDITLENPEFDALFTLSAKGRMMRV
PPKLVELISGTPEEAVDAHSIQPYYTVLLAEEAGMAIDVVSTGEEIVFTARVVAPEAADA
>Mature_219_residues
AKNPNLTLTGHDLAALLCSRVCHDIISPVGAINNGLELLDEGGADADAMDLIRTSALNASVRLKFARLAFGASGSVGASI
DTGEAEKAAKDFAASEKKTEVTWNGPRAIIAKNRVKLLLNLFLIAYGSIPRGGIIDITLENPEFDALFTLSAKGRMMRVP
PKLVELISGTPEEAVDAHSIQPYYTVLLAEEAGMAIDVVSTGEEIVFTARVVAPEAADA

Specific function: Unknown

COG id: COG5385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23204; Mature: 23073

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNPNLTLTGHDLAALLCSRVCHDIISPVGAINNGLELLDEGGADADAMDLIRTSALNA
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCC
SVRLKFARLAFGASGSVGASIDTGEAEKAAKDFAASEKKTEVTWNGPRAIIAKNRVKLLL
EEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEEEEHHHHHHHH
NLFLIAYGSIPRGGIIDITLENPEFDALFTLSAKGRMMRVPPKLVELISGTPEEAVDAHS
HHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCHHHHHHHCCCCHHHHCCCC
IQPYYTVLLAEEAGMAIDVVSTGEEIVFTARVVAPEAADA
CCCEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCCC
>Mature Secondary Structure 
AKNPNLTLTGHDLAALLCSRVCHDIISPVGAINNGLELLDEGGADADAMDLIRTSALNA
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCC
SVRLKFARLAFGASGSVGASIDTGEAEKAAKDFAASEKKTEVTWNGPRAIIAKNRVKLLL
EEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCEEEEEHHHHHHHH
NLFLIAYGSIPRGGIIDITLENPEFDALFTLSAKGRMMRVPPKLVELISGTPEEAVDAHS
HHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCHHHHHHHCCCCHHHHCCCC
IQPYYTVLLAEEAGMAIDVVSTGEEIVFTARVVAPEAADA
CCCEEEEEEECCCCCEEEEECCCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA