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The map label for this gene is aapJ [H]

Identifier: 150397777

GI number: 150397777

Start: 2677799

End: 2678809

Strand: Direct

Name: aapJ [H]

Synonym: Smed_2579

Alternate gene names: 150397777

Gene position: 2677799-2678809 (Clockwise)

Preceding gene: 150397776

Following gene: 150397780

Centisome position: 70.81

GC content: 63.3

Gene sequence:

>1011_bases
ATGAAAACCGGAATCTCGGCACTCTTTGCAGCGGCGCTTCTTGCCGGCACCGCAACGCAGGCCGCGACCCTCGACGTCGT
CAAGCAGCGCGGTGAGTTGCGTTGCGGCGTGAGCCAGGGCGTGCTCGGCTTCTCTGCCCCTGATGACAAGGGCGAGTGGT
CCGGCTTCGATATCGACTTCTGCCGCGCGGTCGCGGCCGCCGCCCTCGGCGACGCGGACCAGGTAAAATATGTGCCGCTT
TCGACCAAGGAACGCTTTACTGCCCTGCAGTCCGGCGAGGTCGATCTGCTGTCGCGCCAGACCACCTGGACGCTGTCGCG
CGATACGGATCTCGGCATGAGCTTCGTCGGCGTGACCTATTACGACGGCCAGGCCTTCATGGTGCGCGACGATATCGGCG
TCAAAAGCGTCAAGGAGCTCTCCGGCGCTTCCGTCTGCACCGAGACCGGCACCACGACCGAGCAGAATATGGCGGACTAT
TTCAGCGCCAACAAGATCGAGTACAAGGTCATCGCCTTCGAAAAGGCCGACCAAACGATCCAGGCCTTCAACGCCGGCCG
CTGCGACGTCTATTCCACCGACGCCTCCGCGCTCTATTCCCAGCGGATGACGCTCAACGATCCCGACCGCTTCGTCGTCC
TGCCGGAGGTCATCTCCAAGGAGCCGCTCGGCCCTGCCGTCCGGCAAGGCGACGACCAGTGGTTCAAAGTGGTTCGCTGG
ACACTCTTCGCGATGGTAGAAGCGGAGGAACTGGGTATCACCCTGGAGTCGGCCGCGTCGCTTCTTGAAAGCGGGACCGT
CGCGCAAAAACGCTTTCTCGGCGTCGACAACGAAGCCGGCAGGGCGCTCGGCCTCAATCCGGATTGGGCTTATCAGGTGG
TCTCGGCCGTCGGCAATTACGGCGAGATCTTCGAGCGTCACCTCGGCCAGGCGAGCGCGCTGAAGATCGATCGCGGCCTC
AACAAGCTCTGGAACGCCGGTGGCCTGATTTACGCTCCGCCGGTCCGCTGA

Upstream 100 bases:

>100_bases
GCTCGACGTAAAGACATCACCGAACCACCAGAGCCATCCGGCGCAACGATGCGTGCGCCGGAGCGAGGAATTGCGTCCAA
AAACGGAGGAGAACAGGACC

Downstream 100 bases:

>100_bases
ACTGAGAGCGGGATGCGGACACGTGTCTGCGGTTTTCCGCCCTCATCCGGCGTCTCGATTGTTACCACCCCTCTTCGAGC
ACCCTGCCCAGCGTGTCGGC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKTGISALFAAALLAGTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAAALGDADQVKYVPL
STKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTYYDGQAFMVRDDIGVKSVKELSGASVCTETGTTTEQNMADY
FSANKIEYKVIAFEKADQTIQAFNAGRCDVYSTDASALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRW
TLFAMVEAEELGITLESAASLLESGTVAQKRFLGVDNEAGRALGLNPDWAYQVVSAVGNYGEIFERHLGQASALKIDRGL
NKLWNAGGLIYAPPVR

Sequences:

>Translated_336_residues
MKTGISALFAAALLAGTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAAALGDADQVKYVPL
STKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTYYDGQAFMVRDDIGVKSVKELSGASVCTETGTTTEQNMADY
FSANKIEYKVIAFEKADQTIQAFNAGRCDVYSTDASALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRW
TLFAMVEAEELGITLESAASLLESGTVAQKRFLGVDNEAGRALGLNPDWAYQVVSAVGNYGEIFERHLGQASALKIDRGL
NKLWNAGGLIYAPPVR
>Mature_336_residues
MKTGISALFAAALLAGTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDFCRAVAAAALGDADQVKYVPL
STKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTYYDGQAFMVRDDIGVKSVKELSGASVCTETGTTTEQNMADY
FSANKIEYKVIAFEKADQTIQAFNAGRCDVYSTDASALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRW
TLFAMVEAEELGITLESAASLLESGTVAQKRFLGVDNEAGRALGLNPDWAYQVVSAVGNYGEIFERHLGQASALKIDRGL
NKLWNAGGLIYAPPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=225, Percent_Identity=23.1111111111111, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36378; Mature: 36378

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGISALFAAALLAGTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDF
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECHHCCCCCCCCCCCCCCCCCCCHHH
CRAVAAAALGDADQVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTY
HHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCEEEEECCEEEEEECCCCCCCEEEEEEE
YDGQAFMVRDDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYKVIAFEKADQTI
ECCEEEEEECCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCEEEEEEEEECCCHHH
QAFNAGRCDVYSTDASALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRW
HHHCCCCCEEEECCHHHHHHCCCCCCCCCCEEECHHHHCCCCCCHHHHCCCHHHHHHHHH
TLFAMVEAEELGITLESAASLLESGTVAQKRFLGVDNEAGRALGLNPDWAYQVVSAVGNY
HHHHHHHHHHHCEEHHHHHHHHHCCCHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCH
GEIFERHLGQASALKIDRGLNKLWNAGGLIYAPPVR
HHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCC
>Mature Secondary Structure
MKTGISALFAAALLAGTATQAATLDVVKQRGELRCGVSQGVLGFSAPDDKGEWSGFDIDF
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECHHCCCCCCCCCCCCCCCCCCCHHH
CRAVAAAALGDADQVKYVPLSTKERFTALQSGEVDLLSRQTTWTLSRDTDLGMSFVGVTY
HHHHHHHHCCCCCCEEEEECCCHHHHHHHCCCCEEEEECCEEEEEECCCCCCCEEEEEEE
YDGQAFMVRDDIGVKSVKELSGASVCTETGTTTEQNMADYFSANKIEYKVIAFEKADQTI
ECCEEEEEECCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCEEEEEEEEECCCHHH
QAFNAGRCDVYSTDASALYSQRMTLNDPDRFVVLPEVISKEPLGPAVRQGDDQWFKVVRW
HHHCCCCCEEEECCHHHHHHCCCCCCCCCCEEECHHHHCCCCCCHHHHCCCHHHHHHHHH
TLFAMVEAEELGITLESAASLLESGTVAQKRFLGVDNEAGRALGLNPDWAYQVVSAVGNY
HHHHHHHHHHHCEEHHHHHHHHHCCCHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHCCH
GEIFERHLGQASALKIDRGLNKLWNAGGLIYAPPVR
HHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]