| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397764
Identifier: 150397764
GI number: 150397764
Start: 2663552
End: 2663701
Strand: Direct
Name: 150397764
Synonym: Smed_2566
Alternate gene names: NA
Gene position: 2663552-2663701 (Clockwise)
Preceding gene: 150397760
Following gene: 150397765
Centisome position: 70.43
GC content: 62.0
Gene sequence:
>150_bases ATGCCCACCCTCTTCCGCTTCCTGTTCATCTGCGCCGTCGCGGCCGGCATGATCTATGGCTCGATGGTGGCGCTCGTCAC CTTCGTCGACCCGGTTGAGCGGGACGTTACGGTGCGCATTCCCTCGGAACGGATCAACAAGCCGCAATGA
Upstream 100 bases:
>100_bases TGCAGCCTTCGTCCATGAACGTGCCGCAGCACATCGAACGGCTGCATGGCCCGTCCGCGAAACGGATCCGGTGTCCCGGT GCCATGCAGAGGAGACCGAA
Downstream 100 bases:
>100_bases CGGATCTGTCGGGAGCACACCTCGAAGCCTTCCTGGAAATGATGAGCGCCGAGCGCGGAGCGGCCGTGAACACGCTGCAA TCCTATGAGCGGGACCTCAG
Product: putative signal peptide protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 49; Mature: 48
Protein sequence:
>49_residues MPTLFRFLFICAVAAGMIYGSMVALVTFVDPVERDVTVRIPSERINKPQ
Sequences:
>Translated_49_residues MPTLFRFLFICAVAAGMIYGSMVALVTFVDPVERDVTVRIPSERINKPQ >Mature_48_residues PTLFRFLFICAVAAGMIYGSMVALVTFVDPVERDVTVRIPSERINKPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5501; Mature: 5369
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLFRFLFICAVAAGMIYGSMVALVTFVDPVERDVTVRIPSERINKPQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCC >Mature Secondary Structure PTLFRFLFICAVAAGMIYGSMVALVTFVDPVERDVTVRIPSERINKPQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA