| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is gloB [H]
Identifier: 150397750
GI number: 150397750
Start: 2650305
End: 2651075
Strand: Direct
Name: gloB [H]
Synonym: Smed_2552
Alternate gene names: 150397750
Gene position: 2650305-2651075 (Clockwise)
Preceding gene: 150397746
Following gene: 150397751
Centisome position: 70.08
GC content: 60.83
Gene sequence:
>771_bases ATGGCCGCCCTCGAACTCGACCTCTTCCTCTGCCGCACCGACAATTACGGTGTGCTCCTCCACGATCGGCTGAGCGGCGC GACGGCATCGATCGACGCACCGGAAGAAAGACCGATCCTCGACGCGCTCGAACGGCGCAGCTGGCAACTGACGCACATCC TCACAACGCATCACCATGGCGACCATGTGGCCGGCAATATCGGTCTGAAGGAACGCTTCGGCGTGACCATCATCGGTCCG AAGAACGAGTCTCCGAAGATCCCTGGTATTGACAGAAGCGTGGGCCATGGCGACCGCTTCGACTTCGCCGGCCACCCAGT CGAGGTCATCGAAACGCCGGGACATACGGCCGGCCACGTCTGCTACCATTTCCCTGAGGACAAGCTGCTTTTCGCCGCCG ATACGCTTTTTGCTCTGGGATGCGGCCGTCTGTTCGAAGGAACGCCCGAAACGATGTGGCAGTCGCTGAGCCGACTGATG GCGCTACCGGATGACACGGCCATTTACTTCGGCCACGAATACACGCTCGCAAACGCGCGTTTCGCCGTCACCGTCGATCC GGAAAACACGGCGCTGAAGGAACGAGCGGCCGAGATCGAGGAGACGCGATCGGACGGCGGATTCACTGCGCCCACAACCA TGGGCCTTGAAAAGCGGACGAACCCGTTCCTGCGCGCCGATGATCCAAAGATCCGCGCCTTTCTGGGCATGGACAAGGCG AGCGATGCCGCCGTCTTCGCAGAAATACGCAAACGCAAGGACAGTTTTTGA
Upstream 100 bases:
>100_bases ATGTTAGACTCGAAGCGGTAGACTTCAAGGCGAGCCTCGCTACATTCGATCGAACGGGATCGCCCCGTCCCGATAACCGG CACCGATCGGAGGACCAATC
Downstream 100 bases:
>100_bases TGACGACCCGGGAGATGACGGCGGCAGCCATTATCGAAACCCTGAGGCTCGCGCGGCATCCTGAGGGTGGCTGGTATGGC GAGACATTCCGCGACGCCGA
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAALELDLFLCRTDNYGVLLHDRLSGATASIDAPEERPILDALERRSWQLTHILTTHHHGDHVAGNIGLKERFGVTIIGP KNESPKIPGIDRSVGHGDRFDFAGHPVEVIETPGHTAGHVCYHFPEDKLLFAADTLFALGCGRLFEGTPETMWQSLSRLM ALPDDTAIYFGHEYTLANARFAVTVDPENTALKERAAEIEETRSDGGFTAPTTMGLEKRTNPFLRADDPKIRAFLGMDKA SDAAVFAEIRKRKDSF
Sequences:
>Translated_256_residues MAALELDLFLCRTDNYGVLLHDRLSGATASIDAPEERPILDALERRSWQLTHILTTHHHGDHVAGNIGLKERFGVTIIGP KNESPKIPGIDRSVGHGDRFDFAGHPVEVIETPGHTAGHVCYHFPEDKLLFAADTLFALGCGRLFEGTPETMWQSLSRLM ALPDDTAIYFGHEYTLANARFAVTVDPENTALKERAAEIEETRSDGGFTAPTTMGLEKRTNPFLRADDPKIRAFLGMDKA SDAAVFAEIRKRKDSF >Mature_255_residues AALELDLFLCRTDNYGVLLHDRLSGATASIDAPEERPILDALERRSWQLTHILTTHHHGDHVAGNIGLKERFGVTIIGPK NESPKIPGIDRSVGHGDRFDFAGHPVEVIETPGHTAGHVCYHFPEDKLLFAADTLFALGCGRLFEGTPETMWQSLSRLMA LPDDTAIYFGHEYTLANARFAVTVDPENTALKERAAEIEETRSDGGFTAPTTMGLEKRTNPFLRADDPKIRAFLGMDKAS DAAVFAEIRKRKDSF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI14150041, Length=249, Percent_Identity=35.7429718875502, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI94538320, Length=260, Percent_Identity=33.0769230769231, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI94538322, Length=260, Percent_Identity=33.0769230769231, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI21703352, Length=255, Percent_Identity=33.7254901960784, Blast_Score=138, Evalue=4e-33, Organism=Homo sapiens, GI116642887, Length=255, Percent_Identity=33.7254901960784, Blast_Score=138, Evalue=4e-33, Organism=Homo sapiens, GI46361987, Length=188, Percent_Identity=36.7021276595745, Blast_Score=124, Evalue=7e-29, Organism=Homo sapiens, GI41327741, Length=195, Percent_Identity=27.6923076923077, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1786406, Length=246, Percent_Identity=38.2113821138211, Blast_Score=157, Evalue=6e-40, Organism=Escherichia coli, GI1787158, Length=146, Percent_Identity=30.8219178082192, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17536925, Length=261, Percent_Identity=37.5478927203065, Blast_Score=165, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17538952, Length=206, Percent_Identity=27.6699029126214, Blast_Score=72, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320478, Length=244, Percent_Identity=33.1967213114754, Blast_Score=103, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324614, Length=266, Percent_Identity=31.9548872180451, Blast_Score=102, Evalue=4e-23, Organism=Drosophila melanogaster, GI21356335, Length=265, Percent_Identity=35.0943396226415, Blast_Score=168, Evalue=3e-42, Organism=Drosophila melanogaster, GI24667711, Length=265, Percent_Identity=35.0943396226415, Blast_Score=168, Evalue=3e-42, Organism=Drosophila melanogaster, GI24667703, Length=265, Percent_Identity=35.0943396226415, Blast_Score=167, Evalue=4e-42, Organism=Drosophila melanogaster, GI221330176, Length=172, Percent_Identity=31.9767441860465, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28312; Mature: 28181
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALELDLFLCRTDNYGVLLHDRLSGATASIDAPEERPILDALERRSWQLTHILTTHHHG CCEEEEEEEEEECCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHCCEEEEEEEEECCCC DHVAGNIGLKERFGVTIIGPKNESPKIPGIDRSVGHGDRFDFAGHPVEVIETPGHTAGHV CEEEECCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCE CYHFPEDKLLFAADTLFALGCGRLFEGTPETMWQSLSRLMALPDDTAIYFGHEYTLANAR EEECCCCCEEEEHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEECEEEECCCE FAVTVDPENTALKERAAEIEETRSDGGFTAPTTMGLEKRTNPFLRADDPKIRAFLGMDKA EEEEECCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCEECCCCCEEEEECCCCC SDAAVFAEIRKRKDSF CCHHHHHHHHHHCCCC >Mature Secondary Structure AALELDLFLCRTDNYGVLLHDRLSGATASIDAPEERPILDALERRSWQLTHILTTHHHG CEEEEEEEEEECCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHCCEEEEEEEEECCCC DHVAGNIGLKERFGVTIIGPKNESPKIPGIDRSVGHGDRFDFAGHPVEVIETPGHTAGHV CEEEECCCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCE CYHFPEDKLLFAADTLFALGCGRLFEGTPETMWQSLSRLMALPDDTAIYFGHEYTLANAR EEECCCCCEEEEHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEECEEEECCCE FAVTVDPENTALKERAAEIEETRSDGGFTAPTTMGLEKRTNPFLRADDPKIRAFLGMDKA EEEEECCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCEECCCCCEEEEECCCCC SDAAVFAEIRKRKDSF CCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]