| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397709
Identifier: 150397709
GI number: 150397709
Start: 2608061
End: 2608960
Strand: Direct
Name: 150397709
Synonym: Smed_2511
Alternate gene names: NA
Gene position: 2608061-2608960 (Clockwise)
Preceding gene: 150397704
Following gene: 150397716
Centisome position: 68.96
GC content: 64.44
Gene sequence:
>900_bases GTGGAAATCATCTTTGATCAGAGCCTCGTGGAGGCGCACCGCCGGCGCGCGCTGCGCCGGCGTGACGAAAAGGCAGGCTT CCTGCTCGAGATCGTCGCACAGGAATTGGCCGAGCGCGTGAGTGTCGTCGAGCGACAGTTCGAGAAAGGAATGGAATTGC ACGGCTATACGGGCGCTACCGCGCGCAGCCTTTTCACGACCGGCAAGGTCGGCGCGATCGAGCGCGTGGAAACGGACAGC GCCTTCGGCTCAGCCGACGAGCCCGTCACGGAAGCGCCTCTGGAGCGTATTCCGGCGGAGCCGGCCTCGCTCAACCTCCT TGTGTCGCCGCTGTCGCTTCATCTCACCAACGATACGCCCGGCGTCTTCATTCAGGCACGCCGGGCGCTGAAGCCGGACG GACTGTTCCTCGCCGCCATACCCGGCACCGGTACGCTACAGGAACTGCGCGAAGTGCTTCTCGCAGCCGAGGCGGAACTG ACGGGCGGCGCGAGCCCCCGGGTCGTCCCGTTTGCCGACGTGCGCGACATGGGGGCGCTTCTTCAGCGGGCAGGCTTCGC CCTTCCGGTGGCGGATACCGAGACATACACCGTACGCTACGATTCGCTCTTCGGGCTCATCCGGGATCTGCGCGCAATGG GGATGACCAACCCGCTCGCGTCGCGCAATCGCAAGCCGATGCCGCGGCGTTTCTTCCTGAGGGCGGCGGAAATCTATGCG CAGCGCTTTTCCGATCCGGACGGCCGCATACGTGCCACCTTTTCCATCATCTATCTCTCCGGCTGGGCGCCGCACGAAAG CCAGCAGAAGCCGCTCAAACCAGGTTCGGCGAAGCAGCGATTGTCAGAGGCACTCGGCGCAAAAGAGCACAAGTTCAAGG ATGGCGAAGGCGAGTCGTGA
Upstream 100 bases:
>100_bases AAACATGCAGCAACTCAAGTGCTACAGCGACCTTGCACGTCCGATGCGAAGTGCGGCGCTTTAGCCTTTCTCTCGCACGC CTTATTTCGGAGAGACTATC
Downstream 100 bases:
>100_bases TCCGGGTTTTCATGCCCAGGCTGCCTCGAGCGTGCCGGTGATGAAGGTCAGCATGTCGAGCAGTGCGCTCGAGAAATTCT GCAGTCCGATGAGAAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Biotin Biosynthesis Protein BioC; Biotin Synthesis Protein; SAM-Dependent Methyltransferase Protein; Biotin Synthesis Protein BioC; Methyltransferase Domain Family; S-Adenosyl-L-Methionine-Dependent Methyltransferases; Biotin Synthesis Protein Bioc; Methyltransferase Family Protein
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MEIIFDQSLVEAHRRRALRRRDEKAGFLLEIVAQELAERVSVVERQFEKGMELHGYTGATARSLFTTGKVGAIERVETDS AFGSADEPVTEAPLERIPAEPASLNLLVSPLSLHLTNDTPGVFIQARRALKPDGLFLAAIPGTGTLQELREVLLAAEAEL TGGASPRVVPFADVRDMGALLQRAGFALPVADTETYTVRYDSLFGLIRDLRAMGMTNPLASRNRKPMPRRFFLRAAEIYA QRFSDPDGRIRATFSIIYLSGWAPHESQQKPLKPGSAKQRLSEALGAKEHKFKDGEGES
Sequences:
>Translated_299_residues MEIIFDQSLVEAHRRRALRRRDEKAGFLLEIVAQELAERVSVVERQFEKGMELHGYTGATARSLFTTGKVGAIERVETDS AFGSADEPVTEAPLERIPAEPASLNLLVSPLSLHLTNDTPGVFIQARRALKPDGLFLAAIPGTGTLQELREVLLAAEAEL TGGASPRVVPFADVRDMGALLQRAGFALPVADTETYTVRYDSLFGLIRDLRAMGMTNPLASRNRKPMPRRFFLRAAEIYA QRFSDPDGRIRATFSIIYLSGWAPHESQQKPLKPGSAKQRLSEALGAKEHKFKDGEGES >Mature_299_residues MEIIFDQSLVEAHRRRALRRRDEKAGFLLEIVAQELAERVSVVERQFEKGMELHGYTGATARSLFTTGKVGAIERVETDS AFGSADEPVTEAPLERIPAEPASLNLLVSPLSLHLTNDTPGVFIQARRALKPDGLFLAAIPGTGTLQELREVLLAAEAEL TGGASPRVVPFADVRDMGALLQRAGFALPVADTETYTVRYDSLFGLIRDLRAMGMTNPLASRNRKPMPRRFFLRAAEIYA QRFSDPDGRIRATFSIIYLSGWAPHESQQKPLKPGSAKQRLSEALGAKEHKFKDGEGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI40018642, Length=287, Percent_Identity=37.6306620209059, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI86792933, Length=282, Percent_Identity=34.3971631205674, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17535003, Length=292, Percent_Identity=30.1369863013699, Blast_Score=117, Evalue=5e-27, Organism=Drosophila melanogaster, GI19922210, Length=293, Percent_Identity=34.1296928327645, Blast_Score=160, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32942; Mature: 32942
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIFDQSLVEAHRRRALRRRDEKAGFLLEIVAQELAERVSVVERQFEKGMELHGYTGAT CCEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH ARSLFTTGKVGAIERVETDSAFGSADEPVTEAPLERIPAEPASLNLLVSPLSLHLTNDTP HHHHHHCCCCCCHHEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECEEEEECCCCC GVFIQARRALKPDGLFLAAIPGTGTLQELREVLLAAEAELTGGASPRVVPFADVRDMGAL CEEEEEHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH LQRAGFALPVADTETYTVRYDSLFGLIRDLRAMGMTNPLASRNRKPMPRRFFLRAAEIYA HHHCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHH QRFSDPDGRIRATFSIIYLSGWAPHESQQKPLKPGSAKQRLSEALGAKEHKFKDGEGES HHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCC >Mature Secondary Structure MEIIFDQSLVEAHRRRALRRRDEKAGFLLEIVAQELAERVSVVERQFEKGMELHGYTGAT CCEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHH ARSLFTTGKVGAIERVETDSAFGSADEPVTEAPLERIPAEPASLNLLVSPLSLHLTNDTP HHHHHHCCCCCCHHEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECEEEEECCCCC GVFIQARRALKPDGLFLAAIPGTGTLQELREVLLAAEAELTGGASPRVVPFADVRDMGAL CEEEEEHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHH LQRAGFALPVADTETYTVRYDSLFGLIRDLRAMGMTNPLASRNRKPMPRRFFLRAAEIYA HHHCCCEEEECCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHH QRFSDPDGRIRATFSIIYLSGWAPHESQQKPLKPGSAKQRLSEALGAKEHKFKDGEGES HHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA