| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is yieF [H]
Identifier: 150397603
GI number: 150397603
Start: 2479092
End: 2479649
Strand: Reverse
Name: yieF [H]
Synonym: Smed_2403
Alternate gene names: 150397603
Gene position: 2479649-2479092 (Counterclockwise)
Preceding gene: 150397604
Following gene: 150397600
Centisome position: 65.57
GC content: 62.01
Gene sequence:
>558_bases ATGACGAAGCTTCTCGGCATATCGGGCAGCCTGCGGAAGGCCTCCTACAACACCGCATTGCTCAGAGCCGCACAAACAGT GGCGCCGGACGGGGTGACGTTCGAGACCGCGACATTGCATGGCATCCCTCTTTATGATGGAGACCTGGAGGCAGAAAGCG GCGTCCCGGCCGCCGCAGAGGCGCTCAAGCGTAAGATCGTCGCGGCCGATGGCGTCATCCTTTTTACGCCGGAATACAAC AACTCGGTCCCGGGCGTTTTCAAGAATGCGATCGACTGGCTGAGCCGCCCGCCAGCCGATATAAAGAAGGTCTTCGGCGG CCGGCCGTTCGCACTTGCCGGCGGTTCTTCCGGAAGCTTCGGGACCATTCTCAGCCAGAACGCCTGGTTGGCGGTGATGC GGACGCTCGGCGCCGAAATCTGGTCGGGCAAGCGGCTGATGGTGCCGAAGGCCGACACGCTTTTCGATGACGCGGGACGG CTGAAAGACGAGCAGACACGCGAGCGGCTAGGCGGTTTCATCAAAGCCTTTGCCGACCACGTCGCGACGAAGGCATAG
Upstream 100 bases:
>100_bases GATACGGAAAGCCGGGACGATCCGGCTTTCCTTTTGCGCAGATGCCCCTAAATCATTCGCTGAGTTGAATAATGGCGTCG CGAGCGAAGGATGGTTACCC
Downstream 100 bases:
>100_bases TCAGAGACCGGATTCGGTGAGCCACGGCCGGATCACGGCTATATCCTCGACCCCTATTCCGTGGCCGATATCGAGGTCGA TCGCCTCGAAATTCGCGCCG
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTKLLGISGSLRKASYNTALLRAAQTVAPDGVTFETATLHGIPLYDGDLEAESGVPAAAEALKRKIVAADGVILFTPEYN NSVPGVFKNAIDWLSRPPADIKKVFGGRPFALAGGSSGSFGTILSQNAWLAVMRTLGAEIWSGKRLMVPKADTLFDDAGR LKDEQTRERLGGFIKAFADHVATKA
Sequences:
>Translated_185_residues MTKLLGISGSLRKASYNTALLRAAQTVAPDGVTFETATLHGIPLYDGDLEAESGVPAAAEALKRKIVAADGVILFTPEYN NSVPGVFKNAIDWLSRPPADIKKVFGGRPFALAGGSSGSFGTILSQNAWLAVMRTLGAEIWSGKRLMVPKADTLFDDAGR LKDEQTRERLGGFIKAFADHVATKA >Mature_184_residues TKLLGISGSLRKASYNTALLRAAQTVAPDGVTFETATLHGIPLYDGDLEAESGVPAAAEALKRKIVAADGVILFTPEYNN SVPGVFKNAIDWLSRPPADIKKVFGGRPFALAGGSSGSFGTILSQNAWLAVMRTLGAEIWSGKRLMVPKADTLFDDAGRL KDEQTRERLGGFIKAFADHVATKA
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=181, Percent_Identity=35.3591160220994, Blast_Score=106, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19649; Mature: 19517
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLLGISGSLRKASYNTALLRAAQTVAPDGVTFETATLHGIPLYDGDLEAESGVPAAAE CCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHH ALKRKIVAADGVILFTPEYNNSVPGVFKNAIDWLSRPPADIKKVFGGRPFALAGGSSGSF HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCC GTILSQNAWLAVMRTLGAEIWSGKRLMVPKADTLFDDAGRLKDEQTRERLGGFIKAFADH CHHHCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHH VATKA HHCCC >Mature Secondary Structure TKLLGISGSLRKASYNTALLRAAQTVAPDGVTFETATLHGIPLYDGDLEAESGVPAAAE CCEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHH ALKRKIVAADGVILFTPEYNNSVPGVFKNAIDWLSRPPADIKKVFGGRPFALAGGSSGSF HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCC GTILSQNAWLAVMRTLGAEIWSGKRLMVPKADTLFDDAGRLKDEQTRERLGGFIKAFADH CHHHCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHH VATKA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]