Click here to switch to the map view.

The map label for this gene is ssuC [C]

Identifier: 150397572

GI number: 150397572

Start: 2449692

End: 2450561

Strand: Direct

Name: ssuC [C]

Synonym: Smed_2372

Alternate gene names: 150397572

Gene position: 2449692-2450561 (Clockwise)

Preceding gene: 150397571

Following gene: 150397573

Centisome position: 64.77

GC content: 63.68

Gene sequence:

>870_bases
ATGAACCTTGCCGCTCTCGCCGGCGCAATCCTCTTCTGGCTCGCGGCCTGGGCCCTCAACCAATGGCTGGTCCAAAAGCG
GTTCGCAAGCAACGTCGCGAACAATGCGGCACATCTCGCCGTGCCGCTCCTCTTCGGCATCACCATACTCGTGCTCTGGG
AAGGCATCGTCCGCGGCTTCGCCGTTCCATCGGTGCTGCTGCCGGCGCCATCGATGATCTGGCTGCGGCTGATAAATTCG
CTGCCGACGCTGGCCGCGGACTTCCGGCAGACCTTCCTGAAATCCGTGCTGACCGGCTACGCCCTCGGCTGCGGCCTCGG
CTTCATCGTCGCCATCCTCATCGACCGTTCGCCCTTCCTGCAGAAGGGCCTTCTGCCGCTCGGCAACTTCGTCTCCGCCC
TCCCCGTCATCGGAGTAGCCCCGATCATGGTCATGTGGTTCGGCTTCGACTGGCCGTCGAAGGTCGCGGTCGTCGTCATC
ATGACCTTCTTCCCGATGCTGGTGAACACCGTTTCCGGCCTGGCAGCCGCGAGTCACATGGAGCGCGACCTGATGCGGAC
TTACGCGGCTTCCTGGTGGCAGACGCTCCTCAAGCTCCGCTTGCCGGCCGCCTGGCCTTTCATTTTCAACGCTCTCAAGA
TTAACTCCACCTTGGCCCTGATCGGTGCGATCGTGGCCGAGTTCTTCGGAACGCCCATCGTCGGCATGGGTTTCCGCATC
TCCACGGAAGTGGGCCGCATGAATGTCGACATGGTCTGGGCCGAAATCGCCGTCGCGGCGGTGGCTGGCTCGGCCTTTTA
CGGGGTCGTCGCGCTTGCCGAGCGAGCCGTCACCTTCTGGCATCCGTCCATCCGAAGTGGCCGGGCCTGA

Upstream 100 bases:

>100_bases
TCTGGGCGGCGCTGTTCATGGCCGCGGCCCTTGCCGCGATCCTCGTCATGATCGTCGGTCTGGCGCACACGGCCGTCCTG
AAGCGCATGGGAGCAAAACC

Downstream 100 bases:

>100_bases
CATGAAACAACGATAAGAGGGAACTGAAATGACGAACAAACTCGCATCTCTACTGGCAGCGGGCGCCTTTTCGCTCGCCG
CCTTCCATGCCAATGCCGCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MNLAALAGAILFWLAAWALNQWLVQKRFASNVANNAAHLAVPLLFGITILVLWEGIVRGFAVPSVLLPAPSMIWLRLINS
LPTLAADFRQTFLKSVLTGYALGCGLGFIVAILIDRSPFLQKGLLPLGNFVSALPVIGVAPIMVMWFGFDWPSKVAVVVI
MTFFPMLVNTVSGLAAASHMERDLMRTYAASWWQTLLKLRLPAAWPFIFNALKINSTLALIGAIVAEFFGTPIVGMGFRI
STEVGRMNVDMVWAEIAVAAVAGSAFYGVVALAERAVTFWHPSIRSGRA

Sequences:

>Translated_289_residues
MNLAALAGAILFWLAAWALNQWLVQKRFASNVANNAAHLAVPLLFGITILVLWEGIVRGFAVPSVLLPAPSMIWLRLINS
LPTLAADFRQTFLKSVLTGYALGCGLGFIVAILIDRSPFLQKGLLPLGNFVSALPVIGVAPIMVMWFGFDWPSKVAVVVI
MTFFPMLVNTVSGLAAASHMERDLMRTYAASWWQTLLKLRLPAAWPFIFNALKINSTLALIGAIVAEFFGTPIVGMGFRI
STEVGRMNVDMVWAEIAVAAVAGSAFYGVVALAERAVTFWHPSIRSGRA
>Mature_289_residues
MNLAALAGAILFWLAAWALNQWLVQKRFASNVANNAAHLAVPLLFGITILVLWEGIVRGFAVPSVLLPAPSMIWLRLINS
LPTLAADFRQTFLKSVLTGYALGCGLGFIVAILIDRSPFLQKGLLPLGNFVSALPVIGVAPIMVMWFGFDWPSKVAVVVI
MTFFPMLVNTVSGLAAASHMERDLMRTYAASWWQTLLKLRLPAAWPFIFNALKINSTLALIGAIVAEFFGTPIVGMGFRI
STEVGRMNVDMVWAEIAVAAVAGSAFYGVVALAERAVTFWHPSIRSGRA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31374; Mature: 31374

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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EHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]