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The map label for this gene is yogA [H]

Identifier: 150397562

GI number: 150397562

Start: 2439122

End: 2440225

Strand: Reverse

Name: yogA [H]

Synonym: Smed_2362

Alternate gene names: 150397562

Gene position: 2440225-2439122 (Counterclockwise)

Preceding gene: 150397565

Following gene: 150397559

Centisome position: 64.52

GC content: 61.41

Gene sequence:

>1104_bases
ATGATGGGAAATCATACCGCAACTGGAGAGGCAAATTCAACACTATGCTCGCCCGACCGAAACAGATGGAAAGGAACGAG
CATGTCGAAATGGATGCAGGAATGGAGCACGGCGGCGGTGGGTCCGCACGATCTCAAGCTTGCTGAACGGCCGCTGCCGG
AGGTCGGCGAGCACGATGTCCTCGTGCGGACGCTCGCCGTGTCGCTCAACTATCGCGACAAGCTGGTACTCGAGACCGGC
ATGGGGCTTGATCTCGCTTTTCCCTTCGTGCCGGCCTCCGACATGAGCGGAGTGGTCGAAGCGGTCGGCAAGAGCGTCAC
GCGTTTCCAGCCAGGCGATCGCGTGATCTCTACCTTCTCTCCCGGTTGGATCGATGGTTTAAGGCCGGGCAACGGCAGGA
CGCCTGCCTATGCGACGCTTGGCGGCGCTTTTCCCGGCGTCATGTCGGAATATGTTGCCTTTCCGGAAGACTGGTTCGTG
GCGGCTCCCAAAAGCCTTGATGCCGCGGAGGCGAGCACCCTGCCATGCGCCGGGCTTACCGCCTGGTTTGCTCTTGTCGA
AAGAGGGCACTTGAGAGCCGGAGACCGTGTCCTGGTGCAGGGGACAGGCGGAGTTGCGCTTTTCGGCCTGCAGATCGCCA
AGGCAACCGGTGCCGAAGTCATCATCACCTCGAGCAGCGCGGAAAAGCTCGAACGGGCACTGTCCCTTGGAGCCGATCAC
GGCATCAACCGTTCAAGCGAGGATTGGGTGGAGCGCCTATATCAGCTCACCGCGGACCATGGCGCGGATCACATTTTGGA
GATCGCCGGCGGTGCAGGGCTCGGTCAGTCGCTGAGGGCTGTCGCGCCGGACGGGCGCATTTCGGTGATCGGCGTGCTCG
AAGGCTTCGAGGTTTCCGGCCCTGTTGGGCCATTGCTTCTGAAGTCGCCGGTCGTGCAGGGCATCAGCGTCGGCCATCGC
AGGGCACTCGAAGATCTGGTGGGCGCTGTCGAACGCTTGCGGCTGAAGCCCGTTATAGACAAACGCTACAAATTCGCAGA
GTTTCCGGAGGCTCTCGCACATCTCGACCACGGCCCCTTCGGCAAGGTGGTGATAGAGTTCTGA

Upstream 100 bases:

>100_bases
AGTCGCGCGGCGGCAGCGGAAAAGCCGCCGGCGTCGGCGACCTCGACGAAGACCGAAATGCCTGTGAAGCGTTCCATGGA
TTGCGTCCTTTGAGGAACCA

Downstream 100 bases:

>100_bases
GACGACGGCAAGGGAAAAGGCCGCCGGCGATGCCGGCGGCCTTCCCCTTGGCTTGAACAGGCTTTCACTCGGCGGCCTGG
CGGGCCATCGGGTTGTTGGG

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MMGNHTATGEANSTLCSPDRNRWKGTSMSKWMQEWSTAAVGPHDLKLAERPLPEVGEHDVLVRTLAVSLNYRDKLVLETG
MGLDLAFPFVPASDMSGVVEAVGKSVTRFQPGDRVISTFSPGWIDGLRPGNGRTPAYATLGGAFPGVMSEYVAFPEDWFV
AAPKSLDAAEASTLPCAGLTAWFALVERGHLRAGDRVLVQGTGGVALFGLQIAKATGAEVIITSSSAEKLERALSLGADH
GINRSSEDWVERLYQLTADHGADHILEIAGGAGLGQSLRAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHR
RALEDLVGAVERLRLKPVIDKRYKFAEFPEALAHLDHGPFGKVVIEF

Sequences:

>Translated_367_residues
MMGNHTATGEANSTLCSPDRNRWKGTSMSKWMQEWSTAAVGPHDLKLAERPLPEVGEHDVLVRTLAVSLNYRDKLVLETG
MGLDLAFPFVPASDMSGVVEAVGKSVTRFQPGDRVISTFSPGWIDGLRPGNGRTPAYATLGGAFPGVMSEYVAFPEDWFV
AAPKSLDAAEASTLPCAGLTAWFALVERGHLRAGDRVLVQGTGGVALFGLQIAKATGAEVIITSSSAEKLERALSLGADH
GINRSSEDWVERLYQLTADHGADHILEIAGGAGLGQSLRAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHR
RALEDLVGAVERLRLKPVIDKRYKFAEFPEALAHLDHGPFGKVVIEF
>Mature_367_residues
MMGNHTATGEANSTLCSPDRNRWKGTSMSKWMQEWSTAAVGPHDLKLAERPLPEVGEHDVLVRTLAVSLNYRDKLVLETG
MGLDLAFPFVPASDMSGVVEAVGKSVTRFQPGDRVISTFSPGWIDGLRPGNGRTPAYATLGGAFPGVMSEYVAFPEDWFV
AAPKSLDAAEASTLPCAGLTAWFALVERGHLRAGDRVLVQGTGGVALFGLQIAKATGAEVIITSSSAEKLERALSLGADH
GINRSSEDWVERLYQLTADHGADHILEIAGGAGLGQSLRAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHR
RALEDLVGAVERLRLKPVIDKRYKFAEFPEALAHLDHGPFGKVVIEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI194239674, Length=328, Percent_Identity=25.609756097561, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI13236495, Length=328, Percent_Identity=25.609756097561, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI22538446, Length=343, Percent_Identity=29.7376093294461, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI22538444, Length=343, Percent_Identity=29.7376093294461, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI24308257, Length=356, Percent_Identity=24.1573033707865, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI47519420, Length=315, Percent_Identity=30.1587301587302, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI194239676, Length=217, Percent_Identity=27.1889400921659, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI28557745, Length=312, Percent_Identity=29.1666666666667, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI156627571, Length=234, Percent_Identity=31.1965811965812, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI18379349, Length=331, Percent_Identity=24.1691842900302, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1788073, Length=273, Percent_Identity=27.8388278388278, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI87082125, Length=292, Percent_Identity=28.7671232876712, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1790045, Length=332, Percent_Identity=23.4939759036145, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081918, Length=282, Percent_Identity=29.4326241134752, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1790485, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1788075, Length=356, Percent_Identity=23.5955056179775, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789651, Length=274, Percent_Identity=27.3722627737226, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17507255, Length=339, Percent_Identity=27.4336283185841, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562878, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17562876, Length=350, Percent_Identity=24.8571428571429, Blast_Score=68, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6323961, Length=333, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323099, Length=300, Percent_Identity=25.6666666666667, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6324486, Length=333, Percent_Identity=23.4234234234234, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI17737897, Length=232, Percent_Identity=28.448275862069, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 39093; Mature: 39093

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGNHTATGEANSTLCSPDRNRWKGTSMSKWMQEWSTAAVGPHDLKLAERPLPEVGEHDV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHH
LVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFQPGDRVISTFS
EEHHHHHHCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHCCHHHHCCCCCCEEECCC
PGWIDGLRPGNGRTPAYATLGGAFPGVMSEYVAFPEDWFVAAPKSLDAAEASTLPCAGLT
CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCEEECCCCCCCHHCCCCCCHHHH
AWFALVERGHLRAGDRVLVQGTGGVALFGLQIAKATGAEVIITSSSAEKLERALSLGADH
HHHHHHHCCCCCCCCEEEEEECCCEEEEEEEHHCCCCCEEEEECCCHHHHHHHHHCCCCC
GINRSSEDWVERLYQLTADHGADHILEIAGGAGLGQSLRAVAPDGRISVIGVLEGFEVSG
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCC
PVGPLLLKSPVVQGISVGHRRALEDLVGAVERLRLKPVIDKRYKFAEFPEALAHLDHGPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
GKVVIEF
CCEEEEC
>Mature Secondary Structure
MMGNHTATGEANSTLCSPDRNRWKGTSMSKWMQEWSTAAVGPHDLKLAERPLPEVGEHDV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHH
LVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFQPGDRVISTFS
EEHHHHHHCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHCCHHHHCCCCCCEEECCC
PGWIDGLRPGNGRTPAYATLGGAFPGVMSEYVAFPEDWFVAAPKSLDAAEASTLPCAGLT
CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCEEECCCCCCCHHCCCCCCHHHH
AWFALVERGHLRAGDRVLVQGTGGVALFGLQIAKATGAEVIITSSSAEKLERALSLGADH
HHHHHHHCCCCCCCCEEEEEECCCEEEEEEEHHCCCCCEEEEECCCHHHHHHHHHCCCCC
GINRSSEDWVERLYQLTADHGADHILEIAGGAGLGQSLRAVAPDGRISVIGVLEGFEVSG
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHCCCCCCEEEEEEECCCCCCC
PVGPLLLKSPVVQGISVGHRRALEDLVGAVERLRLKPVIDKRYKFAEFPEALAHLDHGPF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
GKVVIEF
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]