Click here to switch to the map view.

The map label for this gene is 150397548

Identifier: 150397548

GI number: 150397548

Start: 2423913

End: 2424488

Strand: Reverse

Name: 150397548

Synonym: Smed_2348

Alternate gene names: NA

Gene position: 2424488-2423913 (Counterclockwise)

Preceding gene: 150397549

Following gene: 150397546

Centisome position: 64.11

GC content: 56.08

Gene sequence:

>576_bases
ATGACATCGCTGCCGTTCACCGCCCCGTATTGCCGGAACTGCGCTAGCCGCCGCGGTTATGCTAATTGCCGCCCAAGCGC
AGAAAGCTTCGGAAGATTCGACTTCACTCCCACCAGTAAGAGAAGGATGCACATGAAGACCGAGCTCCAGTTCGCGATGT
TTGCCTTGGCCCTCGCTGTTTCAGGCCCCGCCCTCGCGCAAGACAACAAGGCGTCCATCGTTGGTGCATGGCGAATGACG
TCCCTGCAGTTCACGAATTCGGAAGGCAGTTTGGCCGAGGTGCCGTACTCCGGCCAGGTCATCTTCTCTCAGAGCGGTTC
GCTCTCGGTTCAGGCAATGGACCCGGATCCCGCCGCAAAACCGACCACCTACACGGCGAACGGCTATGAAGCCTATTATG
GTCCGGTCGAGATCGATGAGGCAAAAAATACCTTCACCATTACGGTTGAGTCGTCTTTGGTGCGCGACCTCATTGGCCAG
AAATTGGTGCGAAAATTCCAAGTAACCGAAGATCAGCTTGTTATCCTGCCAGCCGATCCCAGTGAAGGTTGGCGCGTCAC
ATACGAACGGTTTTGA

Upstream 100 bases:

>100_bases
CGGCGGTGCTGCCGCTTCGAGTTTGGCTGCGGCCCTCGCTCCCACGACATCAACGAAATCCTGTTCCGACCGACCGGCCA
GCCGGTTTGAGGTGGTGAAC

Downstream 100 bases:

>100_bases
TGGATATCGTCCCCGCAAGGCGGGGCCCATCGTTGACAAACCATGATATGGCGGTTCCTGCCATGGGCCGATCACCGATC
GCAGTCATGCTGTCCGTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTSLPFTAPYCRNCASRRGYANCRPSAESFGRFDFTPTSKRRMHMKTELQFAMFALALAVSGPALAQDNKASIVGAWRMT
SLQFTNSEGSLAEVPYSGQVIFSQSGSLSVQAMDPDPAAKPTTYTANGYEAYYGPVEIDEAKNTFTITVESSLVRDLIGQ
KLVRKFQVTEDQLVILPADPSEGWRVTYERF

Sequences:

>Translated_191_residues
MTSLPFTAPYCRNCASRRGYANCRPSAESFGRFDFTPTSKRRMHMKTELQFAMFALALAVSGPALAQDNKASIVGAWRMT
SLQFTNSEGSLAEVPYSGQVIFSQSGSLSVQAMDPDPAAKPTTYTANGYEAYYGPVEIDEAKNTFTITVESSLVRDLIGQ
KLVRKFQVTEDQLVILPADPSEGWRVTYERF
>Mature_190_residues
TSLPFTAPYCRNCASRRGYANCRPSAESFGRFDFTPTSKRRMHMKTELQFAMFALALAVSGPALAQDNKASIVGAWRMTS
LQFTNSEGSLAEVPYSGQVIFSQSGSLSVQAMDPDPAAKPTTYTANGYEAYYGPVEIDEAKNTFTITVESSLVRDLIGQK
LVRKFQVTEDQLVILPADPSEGWRVTYERF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21137; Mature: 21006

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLPFTAPYCRNCASRRGYANCRPSAESFGRFDFTPTSKRRMHMKTELQFAMFALALAV
CCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHH
SGPALAQDNKASIVGAWRMTSLQFTNSEGSLAEVPYSGQVIFSQSGSLSVQAMDPDPAAK
CCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCCCEEEEECCCCEEEEEECCCCCCC
PTTYTANGYEAYYGPVEIDEAKNTFTITVESSLVRDLIGQKLVRKFQVTEDQLVILPADP
CCEEECCCCEEEECCEEECCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
SEGWRVTYERF
CCCCEEEEECC
>Mature Secondary Structure 
TSLPFTAPYCRNCASRRGYANCRPSAESFGRFDFTPTSKRRMHMKTELQFAMFALALAV
CCCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHH
SGPALAQDNKASIVGAWRMTSLQFTNSEGSLAEVPYSGQVIFSQSGSLSVQAMDPDPAAK
CCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEECCCCCEEEEECCCCEEEEEECCCCCCC
PTTYTANGYEAYYGPVEIDEAKNTFTITVESSLVRDLIGQKLVRKFQVTEDQLVILPADP
CCEEECCCCEEEECCEEECCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
SEGWRVTYERF
CCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA