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The map label for this gene is yfiH [C]

Identifier: 150397454

GI number: 150397454

Start: 2331084

End: 2331878

Strand: Direct

Name: yfiH [C]

Synonym: Smed_2254

Alternate gene names: 150397454

Gene position: 2331084-2331878 (Clockwise)

Preceding gene: 150397453

Following gene: 150397455

Centisome position: 61.64

GC content: 63.77

Gene sequence:

>795_bases
ATGCAGGATGATGCCTCGCTATCCCCTGTGCAGAGCCCGCTCTTCGGCGCAAAGGCAGGCCCGTCAATCGCACACGGCTA
TTTCACCCGCGAGGGAGGCGTGTCCGAGGGCATCTATCGCGGCTTGAATGTCGGTCTCGGCTCTCACGACGACCGGGAAC
GAGTCGGCACAAATCGCGCTCGGGTCGCCCGCTGGTTCAATGCGGAGCCACGGCGGCTTGCGACTGTGCACCAGATCCAT
TCACCGGATGCGATCATCGTCGACGCCAGCTATGACGGCACGCGGCCGGATGCCGATGCACTGGTGACGGCGACCCCCGG
CATCGTTCTCGGCGTTCTTTCTGCCGACTGCGGACCAGTTCTGTTTGCCGATCCGGAAGCAGGCGTGATCGGTGCCGCCC
ATGCCGGATGGAAGGGTGCGCTGGGCGGCGTGCTCGAAAGCACCATCGAAGCGATGATCTCGCTTGGTGCCCGTCGCGAG
CGTGTCATTGCCTGCCTGGGCCCGTCGATCAGCCGGAGGCATTACGAGGTTGGCCCCGAATTCGTGGCCCGTTTCGTCGC
CGCAGATGCAAGCTACAAGTCCTTTTTCACCCCGTCCGGCCGCGACGGCCATGCCATGTTCGATCTGCCCGGACTGACGG
TCCGGCGTCTGGCGGAAGCCGGCGTGACCGCGGAAAATCTCGGCATCTGCACCTATGCCGACGAGGACCGCTTTTTCTCC
TACCGCCGTACCACGCACAGGCAGGAGCCTGACTATGGACGGCAGATATCCGCGATTTCCATACGGGAGGCTTGA

Upstream 100 bases:

>100_bases
CCGGGTCAACATCGCGGCGGCAAATCAGCTGCAAGTCGACGGGCCGCAATGCGCCCTCAATTCCAATGAACTTAGAAAAT
CACGAGGGCGAAAACACCGA

Downstream 100 bases:

>100_bases
GATGGCGCTTCACTTCGCCGAAGAGGAATATGCGGCCCGCCTGGCGAGGCTCACGGCCAAGATGCAGGAAGAGAAACTCG
ACGCCGTGCTGCTCTTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQDDASLSPVQSPLFGAKAGPSIAHGYFTREGGVSEGIYRGLNVGLGSHDDRERVGTNRARVARWFNAEPRRLATVHQIH
SPDAIIVDASYDGTRPDADALVTATPGIVLGVLSADCGPVLFADPEAGVIGAAHAGWKGALGGVLESTIEAMISLGARRE
RVIACLGPSISRRHYEVGPEFVARFVAADASYKSFFTPSGRDGHAMFDLPGLTVRRLAEAGVTAENLGICTYADEDRFFS
YRRTTHRQEPDYGRQISAISIREA

Sequences:

>Translated_264_residues
MQDDASLSPVQSPLFGAKAGPSIAHGYFTREGGVSEGIYRGLNVGLGSHDDRERVGTNRARVARWFNAEPRRLATVHQIH
SPDAIIVDASYDGTRPDADALVTATPGIVLGVLSADCGPVLFADPEAGVIGAAHAGWKGALGGVLESTIEAMISLGARRE
RVIACLGPSISRRHYEVGPEFVARFVAADASYKSFFTPSGRDGHAMFDLPGLTVRRLAEAGVTAENLGICTYADEDRFFS
YRRTTHRQEPDYGRQISAISIREA
>Mature_264_residues
MQDDASLSPVQSPLFGAKAGPSIAHGYFTREGGVSEGIYRGLNVGLGSHDDRERVGTNRARVARWFNAEPRRLATVHQIH
SPDAIIVDASYDGTRPDADALVTATPGIVLGVLSADCGPVLFADPEAGVIGAAHAGWKGALGGVLESTIEAMISLGARRE
RVIACLGPSISRRHYEVGPEFVARFVAADASYKSFFTPSGRDGHAMFDLPGLTVRRLAEAGVTAENLGICTYADEDRFFS
YRRTTHRQEPDYGRQISAISIREA

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=254, Percent_Identity=31.8897637795276, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI190194372, Length=254, Percent_Identity=31.8897637795276, Blast_Score=92, Evalue=4e-19,
Organism=Escherichia coli, GI1788945, Length=217, Percent_Identity=38.2488479262673, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28299; Mature: 28299

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDDASLSPVQSPLFGAKAGPSIAHGYFTREGGVSEGIYRGLNVGLGSHDDRERVGTNRA
CCCCCCCCCHHCCCCCCCCCCCHHCCEEECCCCCHHHHHHHHCCCCCCCCCHHHHCCCHH
RVARWFNAEPRRLATVHQIHSPDAIIVDASYDGTRPDADALVTATPGIVLGVLSADCGPV
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCE
LFADPEAGVIGAAHAGWKGALGGVLESTIEAMISLGARRERVIACLGPSISRRHYEVGPE
EEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCHHCCHH
FVARFVAADASYKSFFTPSGRDGHAMFDLPGLTVRRLAEAGVTAENLGICTYADEDRFFS
HHHHHHHCCCCHHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHCEEEEECCCHHHHH
YRRTTHRQEPDYGRQISAISIREA
HHHHCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MQDDASLSPVQSPLFGAKAGPSIAHGYFTREGGVSEGIYRGLNVGLGSHDDRERVGTNRA
CCCCCCCCCHHCCCCCCCCCCCHHCCEEECCCCCHHHHHHHHCCCCCCCCCHHHHCCCHH
RVARWFNAEPRRLATVHQIHSPDAIIVDASYDGTRPDADALVTATPGIVLGVLSADCGPV
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCE
LFADPEAGVIGAAHAGWKGALGGVLESTIEAMISLGARRERVIACLGPSISRRHYEVGPE
EEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCHHCCHH
FVARFVAADASYKSFFTPSGRDGHAMFDLPGLTVRRLAEAGVTAENLGICTYADEDRFFS
HHHHHHHCCCCHHHCCCCCCCCCCEEEECCCHHHHHHHHHCCCHHHCEEEEECCCHHHHH
YRRTTHRQEPDYGRQISAISIREA
HHHHCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]