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The map label for this gene is 150397411

Identifier: 150397411

GI number: 150397411

Start: 2290220

End: 2291434

Strand: Reverse

Name: 150397411

Synonym: Smed_2211

Alternate gene names: NA

Gene position: 2291434-2290220 (Counterclockwise)

Preceding gene: 150397412

Following gene: 150397410

Centisome position: 60.59

GC content: 65.35

Gene sequence:

>1215_bases
GTGATCGGCTTCGCTGTCGGCAGTCCTGCAGACACGCGCAATGCTTATTCCGATCGCGTTCTGAGCCCGGAAGAGACGTT
CGACCGTGTCCGGCCACTGCTTTCCCGGTTCGGCGTGACCCGCATCGCACGGCACACGGGCCTCGACAGGATCGGGCTCC
CGGTCTGGTGCGCCTACACGCCGAACGCACGATCGATCGCGGTTGCGCAGGGCAAGGGATTGACGGATCCGGAGGCGAAG
GTTTCCGCGGTCATGGAGGCGCTGGAGCGCGCCGTTGCCTGCGAGCCCGCCGTCGGAACAATGGTCGCCACGGCCCGGAC
CTTGCGTGCATCCGGACGGACCGTGGAGCTGCTTCCCTGCCTGATTGCGGCCGGGCAGCAGGATATAGGGCCGGACGAAG
AACTCGCATGGGCCCTCGGCTCCGACCTGATCTCCGGCCGCGAGATACTCGTGCCGCTCGCAGCGGCGCTGCTCGACCGT
ACCCTGCATTCGCGTTTCTGGATGTCGTCGGATGGACTTGCGTCGGGAAACGTCGTGGAAGAAGCGATATTGCACGGACT
GCTGGAGCGCATCGAGCGAGACGCGCACGTCCTCTGGGGCATCTCGGGGCGGGAGCACCGTTACGGGTGCTGTGTCGCTC
CCGAGAGCCTGGGCGATGCAGCGTTGAACGGTCTCGTTGAGCGCATTGGGGCCGCCGGACTCGATCTCCGGCTTTTCGAA
ATCACCAGCGACATAGGCATTCCCTGTTTCCTGGCGCTGCTCGGCCCACCCGATATCGCGACCAGGGGCGGTGGCCGCTT
CGTCGAAGTGACGAGCGGCTGCGGCGCACATGTTTTTCCCGCCCGGGCGGCGATCAGGGCGGTGACAGAAGCGGCGCAGT
CCCGGCTCACCTTCATCAGTGGTGCCCGGGACGATGTCTTTCCCGAGACCTTCAACCGGCCCTTGCCGGAACTGACGCGG
CAGGCCTTCCTCGCCGAGCCATCCAGACGGGCCATCGCCAGCCCGCAGGTCGGCGGAAGCCTTGAAGCGCTGCTGCGCCA
CACCGTTGATCACCTGACGAGCGCCGGCGTGCAATCTGCAATTGCGCTTCGTCTGTCGGCGAACGCGCTTCCGTTCTCGG
TCGTCAAGATCTTCGTTCCCAAACTCGAGAATCCGGATGGTGATCGAGCGCGCCGTTTTGGTCCGCGTGCACTATCCAAA
GCGCTCGCATCGTGA

Upstream 100 bases:

>100_bases
CGAACAAGCTCCGCCTGCAGGGCGGGACGATCGTCAAGAATGTTGATCTCGCAGTAGCGGTGTCGTCGGCCGACAAGGTG
TTTTCGGGGCATTTCGACGG

Downstream 100 bases:

>100_bases
CGGGAGCGGGCAATGGGGCTCCGGGCGAAGATCCGCTAAATACTCCACCTGAGCGTGTGCAACGCTCGTGAAACGCGCGG
AAATGCCGAACTCGTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MIGFAVGSPADTRNAYSDRVLSPEETFDRVRPLLSRFGVTRIARHTGLDRIGLPVWCAYTPNARSIAVAQGKGLTDPEAK
VSAVMEALERAVACEPAVGTMVATARTLRASGRTVELLPCLIAAGQQDIGPDEELAWALGSDLISGREILVPLAAALLDR
TLHSRFWMSSDGLASGNVVEEAILHGLLERIERDAHVLWGISGREHRYGCCVAPESLGDAALNGLVERIGAAGLDLRLFE
ITSDIGIPCFLALLGPPDIATRGGGRFVEVTSGCGAHVFPARAAIRAVTEAAQSRLTFISGARDDVFPETFNRPLPELTR
QAFLAEPSRRAIASPQVGGSLEALLRHTVDHLTSAGVQSAIALRLSANALPFSVVKIFVPKLENPDGDRARRFGPRALSK
ALAS

Sequences:

>Translated_404_residues
MIGFAVGSPADTRNAYSDRVLSPEETFDRVRPLLSRFGVTRIARHTGLDRIGLPVWCAYTPNARSIAVAQGKGLTDPEAK
VSAVMEALERAVACEPAVGTMVATARTLRASGRTVELLPCLIAAGQQDIGPDEELAWALGSDLISGREILVPLAAALLDR
TLHSRFWMSSDGLASGNVVEEAILHGLLERIERDAHVLWGISGREHRYGCCVAPESLGDAALNGLVERIGAAGLDLRLFE
ITSDIGIPCFLALLGPPDIATRGGGRFVEVTSGCGAHVFPARAAIRAVTEAAQSRLTFISGARDDVFPETFNRPLPELTR
QAFLAEPSRRAIASPQVGGSLEALLRHTVDHLTSAGVQSAIALRLSANALPFSVVKIFVPKLENPDGDRARRFGPRALSK
ALAS
>Mature_404_residues
MIGFAVGSPADTRNAYSDRVLSPEETFDRVRPLLSRFGVTRIARHTGLDRIGLPVWCAYTPNARSIAVAQGKGLTDPEAK
VSAVMEALERAVACEPAVGTMVATARTLRASGRTVELLPCLIAAGQQDIGPDEELAWALGSDLISGREILVPLAAALLDR
TLHSRFWMSSDGLASGNVVEEAILHGLLERIERDAHVLWGISGREHRYGCCVAPESLGDAALNGLVERIGAAGLDLRLFE
ITSDIGIPCFLALLGPPDIATRGGGRFVEVTSGCGAHVFPARAAIRAVTEAAQSRLTFISGARDDVFPETFNRPLPELTR
QAFLAEPSRRAIASPQVGGSLEALLRHTVDHLTSAGVQSAIALRLSANALPFSVVKIFVPKLENPDGDRARRFGPRALSK
ALAS

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 43001; Mature: 43001

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFAVGSPADTRNAYSDRVLSPEETFDRVRPLLSRFGVTRIARHTGLDRIGLPVWCAYT
CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PNARSIAVAQGKGLTDPEAKVSAVMEALERAVACEPAVGTMVATARTLRASGRTVELLPC
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHH
LIAAGQQDIGPDEELAWALGSDLISGREILVPLAAALLDRTLHSRFWMSSDGLASGNVVE
HHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
EAILHGLLERIERDAHVLWGISGREHRYGCCVAPESLGDAALNGLVERIGAAGLDLRLFE
HHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEE
ITSDIGIPCFLALLGPPDIATRGGGRFVEVTSGCGAHVFPARAAIRAVTEAAQSRLTFIS
EHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GARDDVFPETFNRPLPELTRQAFLAEPSRRAIASPQVGGSLEALLRHTVDHLTSAGVQSA
CCCCCCCHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IALRLSANALPFSVVKIFVPKLENPDGDRARRFGPRALSKALAS
HHHEEECCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MIGFAVGSPADTRNAYSDRVLSPEETFDRVRPLLSRFGVTRIARHTGLDRIGLPVWCAYT
CCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
PNARSIAVAQGKGLTDPEAKVSAVMEALERAVACEPAVGTMVATARTLRASGRTVELLPC
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHH
LIAAGQQDIGPDEELAWALGSDLISGREILVPLAAALLDRTLHSRFWMSSDGLASGNVVE
HHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
EAILHGLLERIERDAHVLWGISGREHRYGCCVAPESLGDAALNGLVERIGAAGLDLRLFE
HHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEE
ITSDIGIPCFLALLGPPDIATRGGGRFVEVTSGCGAHVFPARAAIRAVTEAAQSRLTFIS
EHHHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GARDDVFPETFNRPLPELTRQAFLAEPSRRAIASPQVGGSLEALLRHTVDHLTSAGVQSA
CCCCCCCHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IALRLSANALPFSVVKIFVPKLENPDGDRARRFGPRALSKALAS
HHHEEECCCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763943 [H]