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The map label for this gene is 150397403

Identifier: 150397403

GI number: 150397403

Start: 2284287

End: 2284583

Strand: Reverse

Name: 150397403

Synonym: Smed_2202

Alternate gene names: NA

Gene position: 2284583-2284287 (Counterclockwise)

Preceding gene: 150397404

Following gene: 150397401

Centisome position: 60.41

GC content: 62.29

Gene sequence:

>297_bases
ATGAGCAAGGTTGCCGACAGCATCCGGCGCGGCCTGAACGAAGCGCTCGCCTGTGCGGAGGGCAGTGCCGATGCGAACGC
CTTTCGCGTCCATGTGCCCGAGCGGATGGACGTGAAGGCGATCCGCACGAAACTCGAAATGACACAGGAAGAATTTGCCG
GACGATTCGGGTTCAGCGTCAACACATTGCGCCATTGGGAACAGGGTTCGCGCCAGCCGGAAGGGCCGACTCGCGCTTAT
CTTCTGGTGATCGACCGCGCTCCGAAGGCCGTTCAGAAGGCGCTGCAGGCAGCGTGA

Upstream 100 bases:

>100_bases
CCTGCGCCAAGAACATGCGGGCCGATCTGGGCCAGCAGGACAGGAACGACTTCCGCCAGTTGACGACCATGCTGGTGGAT
GCATTCAAGAGGAGAAAGCG

Downstream 100 bases:

>100_bases
GACAGTGTAGTCCTGCGCCGCTTCATGCCCGTTTTACTCGAAAACGCAGCAGGAAGCGGCATGGAAGACGAGAGAATCAA
TTCCGGAACGGTCTGGACGG

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain Protein; Transcriptional Regulator; Transcriptional Regulator Xre

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSKVADSIRRGLNEALACAEGSADANAFRVHVPERMDVKAIRTKLEMTQEEFAGRFGFSVNTLRHWEQGSRQPEGPTRAY
LLVIDRAPKAVQKALQAA

Sequences:

>Translated_98_residues
MSKVADSIRRGLNEALACAEGSADANAFRVHVPERMDVKAIRTKLEMTQEEFAGRFGFSVNTLRHWEQGSRQPEGPTRAY
LLVIDRAPKAVQKALQAA
>Mature_97_residues
SKVADSIRRGLNEALACAEGSADANAFRVHVPERMDVKAIRTKLEMTQEEFAGRFGFSVNTLRHWEQGSRQPEGPTRAYL
LVIDRAPKAVQKALQAA

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10869; Mature: 10737

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVADSIRRGLNEALACAEGSADANAFRVHVPERMDVKAIRTKLEMTQEEFAGRFGFSV
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCH
NTLRHWEQGSRQPEGPTRAYLLVIDRAPKAVQKALQAA
HHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
SKVADSIRRGLNEALACAEGSADANAFRVHVPERMDVKAIRTKLEMTQEEFAGRFGFSV
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCH
NTLRHWEQGSRQPEGPTRAYLLVIDRAPKAVQKALQAA
HHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA