| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is gntK [H]
Identifier: 150397355
GI number: 150397355
Start: 2222564
End: 2223847
Strand: Reverse
Name: gntK [H]
Synonym: Smed_2154
Alternate gene names: 150397355
Gene position: 2223847-2222564 (Counterclockwise)
Preceding gene: 150397356
Following gene: 150397354
Centisome position: 58.8
GC content: 67.29
Gene sequence:
>1284_bases ATGAGCGGGGCAAGCGGGTTTGTCCTCGGCATAGACATGGGCACATCCGGTGCGCGAGCCGTGGCGATGACGGCTGCGGG CGAGGTGGTGGCATCGGGGTCGGCCAAACTTGCCGCTTTTTCCGATGATCATCGCGATCCGGTCGGCTGGTGGAAGGCGG TACGGGCCGCGCTCGCGGAGACGCTGGCGGAAATTGAGGTGGCGCATGCGCGCGCCATCTGTATAGACGGTACATCGGGT ACGATGCTCCCGGTCGCAGCCGATGGCGCACCTCTTGCGACGCCGCTGATGTACAACGACCCGGTTCCCGATTCGGCCAT TATCGAGCGTATAGCCGCCCATGCGCCTGAGGAGAGTGCGGCCCACGGCGCGACTTCGGGTCTGGGTAAGCTTTTGACCT TCCAGCCGCTGCCCGGCGTCTTTCGCGTCATCCATCAGGCGGACTGGCTCGCCGGTCATTTCACCGGGCTCTACGACGTC AGCGACGAGAACAATGCGCTGAAGACCGGCTACGATCCGGTAGCCCGCAAATGGCCGGACTGGCTCGCGCGGACCGGCGC GCGCGCCGATCTGCTGCCGGATGTGCTGCCGGCAGGGTCGCCGATCGCGACGGTCTCGCCCGCGGCGGCCGAAGCTTTCG GGCTGCCGAGCGAAGTGCTCGTCGTCGCAGGCACGACAGACGGCTGCGCCTCCTTCCTTGCGACCGGCGCTGACCGGCCG GGTGACGCCGTCAGCGCGCTGGGCACGACGCTGACCGTGAAGATGCTGTCCGATAAGCCGCTCTTTGCGCCGCAATACGG GCTCTACAGCCACCGGATCGGCGACATGTGGCTCGCCGGCGGTGCCTCCAACACGGGCGGCGCGGTGCTTGCTGCGCATT TCGAAACCGGGCGGATCGCCGCCCTCTCGGAGAGCATCGATCCGGCGACGGACACGGGGCTCGACTTCTATCCCCTGCTG AAACCGGGCGAACGGTTTCCCGTTGCCGATCCCGCCTTCCTTCCGCGCATGGAGCCCCGGCCGGCGGAGGACGCGGAATT CCTGAAGGCTATATTCGAGGGGATAGCGGGCGTCGAACGCCTTGCTTACGAACGTCTGGTCTCGCTCGGCAGTCCCGCCT TGCGGTCGATCCGCACCGTTGGCGGCGGCGCGAAGAACGCGACGTGGACTGCGATCCGCAAGCGCAAGCTCGCCGTTCCC TTCCTCCCTGTGCTTTCGGAAGAGGCTGCCGCCGGCGCGGCGCGCCTGGCTCTTTCCGGGGCGAGAGAGGCGGGCCTGTT ATGA
Upstream 100 bases:
>100_bases CCCGTCTGCGCTATCTCACCGATGCGGAGAACGCCGAACTCCTCGGCTGGGACGCGGAAAAATACCGCCAGCAGTTGAAT CGCGCAGGCCAGGTGCTGCA
Downstream 100 bases:
>100_bases GTTCAATCCGTGAAATTCCAGGTCTGTCTGCGATCGCCGGCGCCTTCGATGCCTTTCTCGTCGATCAGTATGGCGTGCTG AGAGATGGTCGCGGACCTTA
Product: carbohydrate kinase FGGY
Products: NA
Alternate protein names: Gluconate kinase [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MSGASGFVLGIDMGTSGARAVAMTAAGEVVASGSAKLAAFSDDHRDPVGWWKAVRAALAETLAEIEVAHARAICIDGTSG TMLPVAADGAPLATPLMYNDPVPDSAIIERIAAHAPEESAAHGATSGLGKLLTFQPLPGVFRVIHQADWLAGHFTGLYDV SDENNALKTGYDPVARKWPDWLARTGARADLLPDVLPAGSPIATVSPAAAEAFGLPSEVLVVAGTTDGCASFLATGADRP GDAVSALGTTLTVKMLSDKPLFAPQYGLYSHRIGDMWLAGGASNTGGAVLAAHFETGRIAALSESIDPATDTGLDFYPLL KPGERFPVADPAFLPRMEPRPAEDAEFLKAIFEGIAGVERLAYERLVSLGSPALRSIRTVGGGAKNATWTAIRKRKLAVP FLPVLSEEAAAGAARLALSGAREAGLL
Sequences:
>Translated_427_residues MSGASGFVLGIDMGTSGARAVAMTAAGEVVASGSAKLAAFSDDHRDPVGWWKAVRAALAETLAEIEVAHARAICIDGTSG TMLPVAADGAPLATPLMYNDPVPDSAIIERIAAHAPEESAAHGATSGLGKLLTFQPLPGVFRVIHQADWLAGHFTGLYDV SDENNALKTGYDPVARKWPDWLARTGARADLLPDVLPAGSPIATVSPAAAEAFGLPSEVLVVAGTTDGCASFLATGADRP GDAVSALGTTLTVKMLSDKPLFAPQYGLYSHRIGDMWLAGGASNTGGAVLAAHFETGRIAALSESIDPATDTGLDFYPLL KPGERFPVADPAFLPRMEPRPAEDAEFLKAIFEGIAGVERLAYERLVSLGSPALRSIRTVGGGAKNATWTAIRKRKLAVP FLPVLSEEAAAGAARLALSGAREAGLL >Mature_426_residues SGASGFVLGIDMGTSGARAVAMTAAGEVVASGSAKLAAFSDDHRDPVGWWKAVRAALAETLAEIEVAHARAICIDGTSGT MLPVAADGAPLATPLMYNDPVPDSAIIERIAAHAPEESAAHGATSGLGKLLTFQPLPGVFRVIHQADWLAGHFTGLYDVS DENNALKTGYDPVARKWPDWLARTGARADLLPDVLPAGSPIATVSPAAAEAFGLPSEVLVVAGTTDGCASFLATGADRPG DAVSALGTTLTVKMLSDKPLFAPQYGLYSHRIGDMWLAGGASNTGGAVLAAHFETGRIAALSESIDPATDTGLDFYPLLK PGERFPVADPAFLPRMEPRPAEDAEFLKAIFEGIAGVERLAYERLVSLGSPALRSIRTVGGGAKNATWTAIRKRKLAVPF LPVLSEEAAAGAARLALSGAREAGLL
Specific function: Unknown
COG id: COG1070
COG function: function code G; Sugar (pentulose and hexulose) kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Escherichia coli, GI1789987, Length=419, Percent_Identity=26.491646778043, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR006002 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 44095; Mature: 43964
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGASGFVLGIDMGTSGARAVAMTAAGEVVASGSAKLAAFSDDHRDPVGWWKAVRAALAE CCCCCEEEEEEECCCCCCCEEEEEECCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH TLAEIEVAHARAICIDGTSGTMLPVAADGAPLATPLMYNDPVPDSAIIERIAAHAPEESA HHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCCHHH AHGATSGLGKLLTFQPLPGVFRVIHQADWLAGHFTGLYDVSDENNALKTGYDPVARKWPD HCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHCHH WLARTGARADLLPDVLPAGSPIATVSPAAAEAFGLPSEVLVVAGTTDGCASFLATGADRP HHHHCCCCHHHCHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCC GDAVSALGTTLTVKMLSDKPLFAPQYGLYSHRIGDMWLAGGASNTGGAVLAAHFETGRIA CHHHHHHCCEEEEEEECCCCCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEEECCCCEE ALSESIDPATDTGLDFYPLLKPGERFPVADPAFLPRMEPRPAEDAEFLKAIFEGIAGVER EECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LAYERLVSLGSPALRSIRTVGGGAKNATWTAIRKRKLAVPFLPVLSEEAAAGAARLALSG HHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC AREAGLL CHHCCCC >Mature Secondary Structure SGASGFVLGIDMGTSGARAVAMTAAGEVVASGSAKLAAFSDDHRDPVGWWKAVRAALAE CCCCEEEEEEECCCCCCCEEEEEECCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHH TLAEIEVAHARAICIDGTSGTMLPVAADGAPLATPLMYNDPVPDSAIIERIAAHAPEESA HHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCCHHH AHGATSGLGKLLTFQPLPGVFRVIHQADWLAGHFTGLYDVSDENNALKTGYDPVARKWPD HCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHCHH WLARTGARADLLPDVLPAGSPIATVSPAAAEAFGLPSEVLVVAGTTDGCASFLATGADRP HHHHCCCCHHHCHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCC GDAVSALGTTLTVKMLSDKPLFAPQYGLYSHRIGDMWLAGGASNTGGAVLAAHFETGRIA CHHHHHHCCEEEEEEECCCCCCCCCCCCHHHCCCCEEEECCCCCCCCEEEEEEECCCCEE ALSESIDPATDTGLDFYPLLKPGERFPVADPAFLPRMEPRPAEDAEFLKAIFEGIAGVER EECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LAYERLVSLGSPALRSIRTVGGGAKNATWTAIRKRKLAVPFLPVLSEEAAAGAARLALSG HHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC AREAGLL CHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8535972 [H]