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The map label for this gene is yoaV [H]

Identifier: 150397315

GI number: 150397315

Start: 2176299

End: 2177243

Strand: Direct

Name: yoaV [H]

Synonym: Smed_2114

Alternate gene names: 150397315

Gene position: 2176299-2177243 (Clockwise)

Preceding gene: 150397314

Following gene: 150397320

Centisome position: 57.55

GC content: 63.07

Gene sequence:

>945_bases
ATGGCTTCACCCGCAAATTCCATCAGCACTCAGATGACGTTGCGTCTCTGGGCACTGCTCGCGCTACTCGGCCTCATCTG
GGGCGGGTCCTTTTTCTTCGCCCGCGTGGCAGTTGCCCATGTGCCGCCGTTCACCCTCGTGTTCATGCGCCTGAGCCTCG
CAGCTCTCGCCCTGCATTTCTATCTTCTCGGGCGCCACGGCATCTACCAGGCGCTTGCAGAACGCTGGCGCGAATTCCTG
CTGATGGGGCTCATCAACAACGCCATTCCGCATGCTTTCATTTTTCTCGGCCAGACGCATATAGGTGCCGGTCTCGCTGC
CATCCTCAACGCGACGACGCCGATCTGGACGGTCGTCATCGCAAACGTCGCGACCGAGGACGAAAAGCTCAGCGTCGCCA
AGTTCAGCGGTTGCCTGCTCGGGCTTGCCGGTACCATCGTGCTCATAGGTCCGAGCGCAGCGGCAGGGCTCTTCGGCACG
GCCGGCGACGTGCCGCTCTGGGCACTCGTTCTGCCGGTACTCGCCGCTGGAAGCTACGGTCTCTCCGGCAGCTATGGCAA
ACGCTTCCGCGATCTGGCACCGCCGGTGACCGCCGCAGGTCAGCTGACCGCATCGACGCTTGTCATGCTGCCGGTCGCCG
TGCTCGTCGATACGCCTTGGGCCATGCCGATGCCGCCGCTCACCACAGTGCTCGCCATCCTCGGCTTGGCGCTCGTGTCG
ACCGCCTATGCCTACATCCTGTTCTTCCGGATCATGGCTGAAGCAGGCGCCACGAACACTTCGCTGGTAACGCTGCTGGT
GCCGCCAAGCGCCATCCTGCTCGGATATCTCTTTCTGGGAGAAACGCTGCAGGCGACGGACCTCGCCGGAATGCTGCTCA
TTGCCGCCGGTCTGGTTGTCCTTGACGGGCGCATCCTGAGGCTCGGAATTTTCCCGGGACGGTGA

Upstream 100 bases:

>100_bases
AGCGGGTGGCGACACCCGCTTCGCTGGCGTATTGCTTACGCCAGTCCAACATCCCCGGCCAGCCCCTGCCTGAGCCCGGC
GGCTCCAGCGCAGGCGAGAT

Downstream 100 bases:

>100_bases
TCCCACCGCCGTCGCCGAGCCCACGTCCGGTGTGCGGCGATTCACCGATTCATCGTCACGTCACCCGCTCACGCAGCGTT
ACAGGCGGTTACGTTAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MASPANSISTQMTLRLWALLALLGLIWGGSFFFARVAVAHVPPFTLVFMRLSLAALALHFYLLGRHGIYQALAERWREFL
LMGLINNAIPHAFIFLGQTHIGAGLAAILNATTPIWTVVIANVATEDEKLSVAKFSGCLLGLAGTIVLIGPSAAAGLFGT
AGDVPLWALVLPVLAAGSYGLSGSYGKRFRDLAPPVTAAGQLTASTLVMLPVAVLVDTPWAMPMPPLTTVLAILGLALVS
TAYAYILFFRIMAEAGATNTSLVTLLVPPSAILLGYLFLGETLQATDLAGMLLIAAGLVVLDGRILRLGIFPGR

Sequences:

>Translated_314_residues
MASPANSISTQMTLRLWALLALLGLIWGGSFFFARVAVAHVPPFTLVFMRLSLAALALHFYLLGRHGIYQALAERWREFL
LMGLINNAIPHAFIFLGQTHIGAGLAAILNATTPIWTVVIANVATEDEKLSVAKFSGCLLGLAGTIVLIGPSAAAGLFGT
AGDVPLWALVLPVLAAGSYGLSGSYGKRFRDLAPPVTAAGQLTASTLVMLPVAVLVDTPWAMPMPPLTTVLAILGLALVS
TAYAYILFFRIMAEAGATNTSLVTLLVPPSAILLGYLFLGETLQATDLAGMLLIAAGLVVLDGRILRLGIFPGR
>Mature_313_residues
ASPANSISTQMTLRLWALLALLGLIWGGSFFFARVAVAHVPPFTLVFMRLSLAALALHFYLLGRHGIYQALAERWREFLL
MGLINNAIPHAFIFLGQTHIGAGLAAILNATTPIWTVVIANVATEDEKLSVAKFSGCLLGLAGTIVLIGPSAAAGLFGTA
GDVPLWALVLPVLAAGSYGLSGSYGKRFRDLAPPVTAAGQLTASTLVMLPVAVLVDTPWAMPMPPLTTVLAILGLALVST
AYAYILFFRIMAEAGATNTSLVTLLVPPSAILLGYLFLGETLQATDLAGMLLIAAGLVVLDGRILRLGIFPGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32976; Mature: 32845

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPANSISTQMTLRLWALLALLGLIWGGSFFFARVAVAHVPPFTLVFMRLSLAALALHF
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YLLGRHGIYQALAERWREFLLMGLINNAIPHAFIFLGQTHIGAGLAAILNATTPIWTVVI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCHHHHHHH
ANVATEDEKLSVAKFSGCLLGLAGTIVLIGPSAAAGLFGTAGDVPLWALVLPVLAAGSYG
HHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHCCCCC
LSGSYGKRFRDLAPPVTAAGQLTASTLVMLPVAVLVDTPWAMPMPPLTTVLAILGLALVS
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TAYAYILFFRIMAEAGATNTSLVTLLVPPSAILLGYLFLGETLQATDLAGMLLIAAGLVV
HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LDGRILRLGIFPGR
HCCEEEEEECCCCC
>Mature Secondary Structure 
ASPANSISTQMTLRLWALLALLGLIWGGSFFFARVAVAHVPPFTLVFMRLSLAALALHF
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
YLLGRHGIYQALAERWREFLLMGLINNAIPHAFIFLGQTHIGAGLAAILNATTPIWTVVI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHCCCHHHHHHH
ANVATEDEKLSVAKFSGCLLGLAGTIVLIGPSAAAGLFGTAGDVPLWALVLPVLAAGSYG
HHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHCCCCC
LSGSYGKRFRDLAPPVTAAGQLTASTLVMLPVAVLVDTPWAMPMPPLTTVLAILGLALVS
CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
TAYAYILFFRIMAEAGATNTSLVTLLVPPSAILLGYLFLGETLQATDLAGMLLIAAGLVV
HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LDGRILRLGIFPGR
HCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]