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The map label for this gene is yegX [H]

Identifier: 150397313

GI number: 150397313

Start: 2173945

End: 2174730

Strand: Direct

Name: yegX [H]

Synonym: Smed_2112

Alternate gene names: 150397313

Gene position: 2173945-2174730 (Clockwise)

Preceding gene: 150397312

Following gene: 150397314

Centisome position: 57.48

GC content: 59.54

Gene sequence:

>786_bases
ATGCGCCGGTTGTTCGTGGCTTTGCTGCCCATCGCAGCCATCCTGTCCTCCTGCACGTCGACCGACTACGACCTCATCAA
GACGGCTTCCATACAGCCTCGCTTCCACGACACGGATCCGCAGGATTTCGGCGGCAACACGCCACACCATCACAACGTTC
ACGGAATTGACGTCTCCAAGTGGAATGGCGACATCGACTGGCGCAAGGTCAAGAATTCCGGCGTGTCCTTCGCTTTCATC
AAGGCCACGGAAGGCAAGGACAGAGTGGACGCCCGTTTCCACGAATACTGGCCCCAGGCGCGCGCCGCCGGCATCGCCTA
CGCGCCCTACCATTTCTATTATTTCTGCTCGACCGCCGATGCGCAGGCCAATTGGTTCATCGCCAATGTGCCGAAGAGCG
CCGTCTACCTGCCGCCCGTCCTGGACGTCGAGTGGAATGGCGAATCCAAGACCTGCCGCACCCGACCGGCGCCCGAGACG
GTGCGCTCCGAAATGAAGCGCTTCATGGATCGGCTCGAGGCACATTACGGCAAACGGCCAATCATCTACACGTCGGTCGA
TTTTCATCGCGACAATCTGGTCGGCGCCTTCAATGACTATCATTTCTGGGTGCGGTCCGTCGCCAAGCACCCGAAGGATA
TCTACGTCGATCGCCGGTGGGCCTTCTGGCAATATACCAGCACAGGCGTGATCCCCGGCATCCAAGGCAGCACGGACATC
AACGCCTTCGCAGGCTCCCACAGAAATTGGAAGAAGTGGGTCGCGACTGTTTCGCAGGCGAGATAG

Upstream 100 bases:

>100_bases
TGTTATGGTGAAAAGGAGGCCACACCTCCCTGGGGAACTCACCAACTATGGAAATCATCGCGTGAGGCAAGATCGTCTTT
CGTCTGCAAGCGGAGCCCTC

Downstream 100 bases:

>100_bases
ACCACAAGAAGCAGCGGCGTGCTCTGCATTTCTTCATTCGGTCATAATGCTCTGAGAGAGCACCGGCAGTCACCCTCGAC
AGAGTTCAGGCCCGGCGGCA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRRLFVALLPIAAILSSCTSTDYDLIKTASIQPRFHDTDPQDFGGNTPHHHNVHGIDVSKWNGDIDWRKVKNSGVSFAFI
KATEGKDRVDARFHEYWPQARAAGIAYAPYHFYYFCSTADAQANWFIANVPKSAVYLPPVLDVEWNGESKTCRTRPAPET
VRSEMKRFMDRLEAHYGKRPIIYTSVDFHRDNLVGAFNDYHFWVRSVAKHPKDIYVDRRWAFWQYTSTGVIPGIQGSTDI
NAFAGSHRNWKKWVATVSQAR

Sequences:

>Translated_261_residues
MRRLFVALLPIAAILSSCTSTDYDLIKTASIQPRFHDTDPQDFGGNTPHHHNVHGIDVSKWNGDIDWRKVKNSGVSFAFI
KATEGKDRVDARFHEYWPQARAAGIAYAPYHFYYFCSTADAQANWFIANVPKSAVYLPPVLDVEWNGESKTCRTRPAPET
VRSEMKRFMDRLEAHYGKRPIIYTSVDFHRDNLVGAFNDYHFWVRSVAKHPKDIYVDRRWAFWQYTSTGVIPGIQGSTDI
NAFAGSHRNWKKWVATVSQAR
>Mature_261_residues
MRRLFVALLPIAAILSSCTSTDYDLIKTASIQPRFHDTDPQDFGGNTPHHHNVHGIDVSKWNGDIDWRKVKNSGVSFAFI
KATEGKDRVDARFHEYWPQARAAGIAYAPYHFYYFCSTADAQANWFIANVPKSAVYLPPVLDVEWNGESKTCRTRPAPET
VRSEMKRFMDRLEAHYGKRPIIYTSVDFHRDNLVGAFNDYHFWVRSVAKHPKDIYVDRRWAFWQYTSTGVIPGIQGSTDI
NAFAGSHRNWKKWVATVSQAR

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 25 family [H]

Homologues:

Organism=Escherichia coli, GI87082043, Length=231, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002053
- InterPro:   IPR008270
- InterPro:   IPR017853
- InterPro:   IPR018077
- InterPro:   IPR013781 [H]

Pfam domain/function: PF01183 Glyco_hydro_25 [H]

EC number: NA

Molecular weight: Translated: 30002; Mature: 30002

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLFVALLPIAAILSSCTSTDYDLIKTASIQPRFHDTDPQDFGGNTPHHHNVHGIDVSK
CHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEC
WNGDIDWRKVKNSGVSFAFIKATEGKDRVDARFHEYWPQARAAGIAYAPYHFYYFCSTAD
CCCCCCCEECCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHCCEEECCEEEEEEEECCC
AQANWFIANVPKSAVYLPPVLDVEWNGESKTCRTRPAPETVRSEMKRFMDRLEAHYGKRP
CCCCEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
IIYTSVDFHRDNLVGAFNDYHFWVRSVAKHPKDIYVDRRWAFWQYTSTGVIPGIQGSTDI
EEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCEEEECEEEEEEECCCCCCCCCCCCCCC
NAFAGSHRNWKKWVATVSQAR
HHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRRLFVALLPIAAILSSCTSTDYDLIKTASIQPRFHDTDPQDFGGNTPHHHNVHGIDVSK
CHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCHHCCCCCCCCCCCCEEEEEC
WNGDIDWRKVKNSGVSFAFIKATEGKDRVDARFHEYWPQARAAGIAYAPYHFYYFCSTAD
CCCCCCCEECCCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHCCEEECCEEEEEEEECCC
AQANWFIANVPKSAVYLPPVLDVEWNGESKTCRTRPAPETVRSEMKRFMDRLEAHYGKRP
CCCCEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
IIYTSVDFHRDNLVGAFNDYHFWVRSVAKHPKDIYVDRRWAFWQYTSTGVIPGIQGSTDI
EEEEEECCCCCCEEECHHHHHHHHHHHHCCCCCEEEECEEEEEEECCCCCCCCCCCCCCC
NAFAGSHRNWKKWVATVSQAR
HHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]