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The map label for this gene is 150397268

Identifier: 150397268

GI number: 150397268

Start: 2118992

End: 2119393

Strand: Direct

Name: 150397268

Synonym: Smed_2067

Alternate gene names: NA

Gene position: 2118992-2119393 (Clockwise)

Preceding gene: 150397267

Following gene: 150397270

Centisome position: 56.03

GC content: 59.7

Gene sequence:

>402_bases
ATGGAGAGAACCGGCTCTAGCTCCCCATGGAACTGCCGCAGAGGCCCGCTGAATTCGCAGGCGGGCGGGCAGCTTTTTCC
AGGGGCTGCAGCAAATGAATCAGAGGAGGCGGCGATGAGCGGGATTTACGCACCACCGCGAAGCTGGGAAGAGTTGCAGA
GATGCGTTGCGGCGCGAAAACGGGAATTTTCAGCGCAACTCATCCTTCTCGCAGAGTTCGCCCTGCGTCATCCAGACGCG
ATCGCCTTCGGAACATGCGGCTCCATCGCCGCTCATGCAGGAGTGTCAGCGACGACCGTGCCTAGGCTCGCTTCATTTTT
GGGATATCAATCCTTCCGCGATCTCAGGAAGATGTTTCGCGACGACCTGCTGCGCGCTTCCAGTCTCGCTTCCGCCGACT
AG

Upstream 100 bases:

>100_bases
CAGGCAATCACTTGCGTGGTGCGGGACCGCGTGGACGTCAGACCCGGCGATTTAATCCGGCTGTCTCCCGACGCGGATCG
CGTTCACCTGTTCGATCCTG

Downstream 100 bases:

>100_bases
AAGTATGAGTGAACGGCGCCAGAATCCCCCAACCGGATCCGACGATCTTGTCGACCGCGCCTATGAACCGACGTCCATAG
CGGCGAGCCCGTAGCGGCGG

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator Protein; Sugar Isomerase Family Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MERTGSSSPWNCRRGPLNSQAGGQLFPGAAANESEEAAMSGIYAPPRSWEELQRCVAARKREFSAQLILLAEFALRHPDA
IAFGTCGSIAAHAGVSATTVPRLASFLGYQSFRDLRKMFRDDLLRASSLASAD

Sequences:

>Translated_133_residues
MERTGSSSPWNCRRGPLNSQAGGQLFPGAAANESEEAAMSGIYAPPRSWEELQRCVAARKREFSAQLILLAEFALRHPDA
IAFGTCGSIAAHAGVSATTVPRLASFLGYQSFRDLRKMFRDDLLRASSLASAD
>Mature_133_residues
MERTGSSSPWNCRRGPLNSQAGGQLFPGAAANESEEAAMSGIYAPPRSWEELQRCVAARKREFSAQLILLAEFALRHPDA
IAFGTCGSIAAHAGVSATTVPRLASFLGYQSFRDLRKMFRDDLLRASSLASAD

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14348; Mature: 14348

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTGSSSPWNCRRGPLNSQAGGQLFPGAAANESEEAAMSGIYAPPRSWEELQRCVAARK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
REFSAQLILLAEFALRHPDAIAFGTCGSIAAHAGVSATTVPRLASFLGYQSFRDLRKMFR
HHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DDLLRASSLASAD
HHHHHHHHHCCCC
>Mature Secondary Structure
MERTGSSSPWNCRRGPLNSQAGGQLFPGAAANESEEAAMSGIYAPPRSWEELQRCVAARK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
REFSAQLILLAEFALRHPDAIAFGTCGSIAAHAGVSATTVPRLASFLGYQSFRDLRKMFR
HHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DDLLRASSLASAD
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA