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The map label for this gene is zrp [H]

Identifier: 150397171

GI number: 150397171

Start: 2020602

End: 2021120

Strand: Reverse

Name: zrp [H]

Synonym: Smed_1969

Alternate gene names: 150397171

Gene position: 2021120-2020602 (Counterclockwise)

Preceding gene: 150397173

Following gene: 150397170

Centisome position: 53.44

GC content: 58.19

Gene sequence:

>519_bases
ATGAAAGGCGCAAATTTTTCGGCGCATGCCGCGTTAAAGGCAAGGAGTCGGAGCGTGCTAGACGATAGAGACCGGAAGCT
GCTCATGCTTTTGCAGCAGGATGCGAGCGTCCCGATGAGCGATCTTGCCGAGCGGGTGAGCCTTTCTCTTTCCGCCTGCT
CGCGGCGCATTCAGCGGCTCGAGGAAGCGGGGTATGTGAGCAGGCGCATCGTCGTGCTCGACCGCGAGAAGATGGGCGTG
CCGACGACAGTGTTTGCGCTGATCAAGACGGCGCATCATTCCGACGACTGGATAGAAAAGTTTCGGAGAGCGATCAGCGA
CATACCGGAGATCGTCGAGGCGCATCGGCTGACGGGCAATTACGATTACATCGTCAAGGTGGTGCTGCCGAGGGTCGAGC
ACTATGACGTGGTCTACAAGCAGATCGTGCGAAAGGTGGAGCTGTTCGACGTTTCCGCCTCGATTTCCATGGAAGTCCTG
AAAAGCGGTACCGCAGTGCCCGTCGGCTACGCGGATTAG

Upstream 100 bases:

>100_bases
TCTCCGTTCCACTGCTAGATTATCATGCGGGTGGGGTTGGATGCGGTTGCTTTGTCCGGCGTCCCTCTGTATTTTTTCGC
GCAGTATTTGCGTTAAAAAT

Downstream 100 bases:

>100_bases
GGCAAATGTAAGGGGAACGAAGAGCATGCAGGAAAGACATCATGTCGTCGTGATCGGTGGAGGTTTCGGCGGTCTGCAAC
TCGTCAACGACCTCAAGAGC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: Global regulatory protein [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKGANFSAHAALKARSRSVLDDRDRKLLMLLQQDASVPMSDLAERVSLSLSACSRRIQRLEEAGYVSRRIVVLDREKMGV
PTTVFALIKTAHHSDDWIEKFRRAISDIPEIVEAHRLTGNYDYIVKVVLPRVEHYDVVYKQIVRKVELFDVSASISMEVL
KSGTAVPVGYAD

Sequences:

>Translated_172_residues
MKGANFSAHAALKARSRSVLDDRDRKLLMLLQQDASVPMSDLAERVSLSLSACSRRIQRLEEAGYVSRRIVVLDREKMGV
PTTVFALIKTAHHSDDWIEKFRRAISDIPEIVEAHRLTGNYDYIVKVVLPRVEHYDVVYKQIVRKVELFDVSASISMEVL
KSGTAVPVGYAD
>Mature_172_residues
MKGANFSAHAALKARSRSVLDDRDRKLLMLLQQDASVPMSDLAERVSLSLSACSRRIQRLEEAGYVSRRIVVLDREKMGV
PTTVFALIKTAHHSDDWIEKFRRAISDIPEIVEAHRLTGNYDYIVKVVLPRVEHYDVVYKQIVRKVELFDVSASISMEVL
KSGTAVPVGYAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=151, Percent_Identity=41.0596026490066, Blast_Score=131, Evalue=3e-32,
Organism=Escherichia coli, GI1787116, Length=151, Percent_Identity=29.1390728476821, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF09339 HTH_IclR [H]

EC number: NA

Molecular weight: Translated: 19414; Mature: 19414

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGANFSAHAALKARSRSVLDDRDRKLLMLLQQDASVPMSDLAERVSLSLSACSRRIQRL
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EEAGYVSRRIVVLDREKMGVPTTVFALIKTAHHSDDWIEKFRRAISDIPEIVEAHRLTGN
HHCCHHHEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
YDYIVKVVLPRVEHYDVVYKQIVRKVELFDVSASISMEVLKSGTAVPVGYAD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKGANFSAHAALKARSRSVLDDRDRKLLMLLQQDASVPMSDLAERVSLSLSACSRRIQRL
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EEAGYVSRRIVVLDREKMGVPTTVFALIKTAHHSDDWIEKFRRAISDIPEIVEAHRLTGN
HHCCHHHEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
YDYIVKVVLPRVEHYDVVYKQIVRKVELFDVSASISMEVLKSGTAVPVGYAD
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA