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The map label for this gene is 150397168

Identifier: 150397168

GI number: 150397168

Start: 2017427

End: 2018185

Strand: Direct

Name: 150397168

Synonym: Smed_1966

Alternate gene names: NA

Gene position: 2017427-2018185 (Clockwise)

Preceding gene: 150397167

Following gene: 150397172

Centisome position: 53.34

GC content: 60.21

Gene sequence:

>759_bases
ATGACCAAGACCAATCCCAAACGACGGAAGCGCAGCACGCGACGGAAGAGCAGCCAGAATGGTATGGGCCGCTGGTATCT
CGCGGCCGCAATCATCGTCGGAGGGATCGTCGCTTACGATCACCGGGGGGAACTCGACCGTCTGGCCAGTACATCGCAGC
TGACGGCACTACTTTCGCCGGACGAGGAACTCACTGAGAAAAAGGTTCAAGCTAAGAAGAACGCCGAGAAGAGACCGCCA
AAGAAGGTGGAACTCGCGACCATTCCGATCCCTGTCCGTCCAAAGGAACATACGGGATCCATAGCGCAGAAAGCGGCCTT
GATCCCGCCAGCACCCGTCAAGCCGCCAGTGGCCCATTCACTCGAACAGGCTGGCCAGCGGCCACCCGAGAGCGACACCT
TCTTTTTTTGCGGTATTCGGCACGACAATTGCGTCCTGGACGGCGACACGTTCCTGTTCAACGGGCAGAGAATTCTCATT
GCCGACATCGACGCACCGGAAACGAAGCTTGCGAAGTGTGACGAGGAACGATCGCGCGGCTCCTACGCCAAGGCACGGTT
GCGCGAGTTGCTGAATGCAGGAAACTTCGCCCTGGTGGCATCCGAATCCGCCCCGGGCGATGAGCCCGGCAAGCGGCGGC
TCGTCGTCAGAAACGGCAGATCGCTTGGAGACATTCTCATATCGGAGGGACTCGCCAAAAAGCGTAGCGGGCGGCCCCAG
TCATGGTGCGGCCAGTCCACCGCCCGCGTATCCGGTTGA

Upstream 100 bases:

>100_bases
TTCTTCTTCGGCATTGAAAATGAACGGATTGCGCAAGCTACGACAACCTTTCACTAACTCCTGGCCTCGATAATGCCGCC
GCAATCGAGGACCGAATCGC

Downstream 100 bases:

>100_bases
AGCCGCCGGGAACAGGCTGCGGCGCTGTAACGGGAACCTTTATGCGTAGCGGCGGTGATCCGACAGAACGGCGTCGATGA
TCCGCCGCGACTTTTCAACC

Product: putative transmembrane protein

Products: NA

Alternate protein names: Transmembrane Protein; Nuclease Protein; Orf_Bo

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTKTNPKRRKRSTRRKSSQNGMGRWYLAAAIIVGGIVAYDHRGELDRLASTSQLTALLSPDEELTEKKVQAKKNAEKRPP
KKVELATIPIPVRPKEHTGSIAQKAALIPPAPVKPPVAHSLEQAGQRPPESDTFFFCGIRHDNCVLDGDTFLFNGQRILI
ADIDAPETKLAKCDEERSRGSYAKARLRELLNAGNFALVASESAPGDEPGKRRLVVRNGRSLGDILISEGLAKKRSGRPQ
SWCGQSTARVSG

Sequences:

>Translated_252_residues
MTKTNPKRRKRSTRRKSSQNGMGRWYLAAAIIVGGIVAYDHRGELDRLASTSQLTALLSPDEELTEKKVQAKKNAEKRPP
KKVELATIPIPVRPKEHTGSIAQKAALIPPAPVKPPVAHSLEQAGQRPPESDTFFFCGIRHDNCVLDGDTFLFNGQRILI
ADIDAPETKLAKCDEERSRGSYAKARLRELLNAGNFALVASESAPGDEPGKRRLVVRNGRSLGDILISEGLAKKRSGRPQ
SWCGQSTARVSG
>Mature_251_residues
TKTNPKRRKRSTRRKSSQNGMGRWYLAAAIIVGGIVAYDHRGELDRLASTSQLTALLSPDEELTEKKVQAKKNAEKRPPK
KVELATIPIPVRPKEHTGSIAQKAALIPPAPVKPPVAHSLEQAGQRPPESDTFFFCGIRHDNCVLDGDTFLFNGQRILIA
DIDAPETKLAKCDEERSRGSYAKARLRELLNAGNFALVASESAPGDEPGKRRLVVRNGRSLGDILISEGLAKKRSGRPQS
WCGQSTARVSG

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27567; Mature: 27436

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTNPKRRKRSTRRKSSQNGMGRWYLAAAIIVGGIVAYDHRGELDRLASTSQLTALLSP
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHEEEECC
DEELTEKKVQAKKNAEKRPPKKVELATIPIPVRPKEHTGSIAQKAALIPPAPVKPPVAHS
CHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCHHCCHHHHHHCCCCCCCCCCHHHHH
LEQAGQRPPESDTFFFCGIRHDNCVLDGDTFLFNGQRILIADIDAPETKLAKCDEERSRG
HHHHCCCCCCCCCEEEEEECCCCEEECCCEEEECCCEEEEEECCCCHHHHHHHHHHHHCC
SYAKARLRELLNAGNFALVASESAPGDEPGKRRLVVRNGRSLGDILISEGLAKKRSGRPQ
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCH
SWCGQSTARVSG
HHHCCCCCCCCC
>Mature Secondary Structure 
TKTNPKRRKRSTRRKSSQNGMGRWYLAAAIIVGGIVAYDHRGELDRLASTSQLTALLSP
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHEEEECC
DEELTEKKVQAKKNAEKRPPKKVELATIPIPVRPKEHTGSIAQKAALIPPAPVKPPVAHS
CHHHHHHHHHHHHCHHHCCCCCEEEEEECCCCCCCHHCCHHHHHHCCCCCCCCCCHHHHH
LEQAGQRPPESDTFFFCGIRHDNCVLDGDTFLFNGQRILIADIDAPETKLAKCDEERSRG
HHHHCCCCCCCCCEEEEEECCCCEEECCCEEEECCCEEEEEECCCCHHHHHHHHHHHHCC
SYAKARLRELLNAGNFALVASESAPGDEPGKRRLVVRNGRSLGDILISEGLAKKRSGRPQ
HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCH
SWCGQSTARVSG
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA