| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397135
Identifier: 150397135
GI number: 150397135
Start: 1986169
End: 1986918
Strand: Reverse
Name: 150397135
Synonym: Smed_1933
Alternate gene names: NA
Gene position: 1986918-1986169 (Counterclockwise)
Preceding gene: 150397136
Following gene: 150397134
Centisome position: 52.54
GC content: 62.27
Gene sequence:
>750_bases ATGACGCTGCTTGAAACCGATCGTGCGCAATGGCCCGTCGAAGGGAAGATCTTTCCGGTCTCGGACATCGAAATAGAGGT CGCGGCCGAGCCACACCCGTTTCATCTGGCAGAGGCGGAGAAGGCGCGGGAAAGCTGGCAAAAGGAAATCGCCGTGAATC CGCACCTGTTCGACGGCAGGATGGTGCTGCAGCGATCGGTTCTGGTTGCCGACGGTCGTATCCGGGCGCGAGCCCATATC GTCCCCTATTCTACCTTCCTCTGGTGGCGGAAAACGAGGGCGCCGGGGGCAAGCCACATTTTCGGCATGCCGATGCTCGT TTCCTCGGACGACGCCCTGATTGCCATTCGCATGGGTGCACACACGGCCAATCCGGGGCGGGTCTATAGCCCGGGTGGTT CGCTCGAGCCGGAGGATATCGTCGACGGGCGCTGCGATGTCGCTCGCAACATCGCGCGCGAGGTAAAGGAGGAGACTGGC ATTTCGCTCTCCGAGGCAACCGCAGAACCGGGTTGGCACGCCATCCACATGGATGGCACGCTTACGGTGTTCCGCGTGTT TCGACTGGCGGCCACGGCCGAGGACATCGTTGCCCGAGTGGCGGAGCATGTCGCTTCCGATCCGCATCCGGAGATCGACG AGGCGGTGGCGATCCGTGAGCCGGAGCCGACCGCACATAATTATCCCGAGTTCATCCCACCGATACTCGATTGGCTTTTT GCGCGCATCCGGGGGCAGCAGATGGCGTGA
Upstream 100 bases:
>100_bases TTCCCGCAGGCCAGGAGGTCGAACGCTATCCGCGTACCGGCTGGGACCGGCCCAAAGCCTCCGACCATTGCCCGGTCGTG ATGACGCTGGACATTTGATC
Downstream 100 bases:
>100_bases CGGAGGCCCGCCGGCGGCTTTTTGCCTTGCCGCCGGGACGCTGGCGTTGCAAGGTCGCAAGCGGTTCGGCACCGCGAGAG TACGCACCCGGCGTCCAGGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; NUDIX Hydrolase Family Protein; Nudix Hydrolase; NTP Pyrophosphohydrolase Protein
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTLLETDRAQWPVEGKIFPVSDIEIEVAAEPHPFHLAEAEKARESWQKEIAVNPHLFDGRMVLQRSVLVADGRIRARAHI VPYSTFLWWRKTRAPGASHIFGMPMLVSSDDALIAIRMGAHTANPGRVYSPGGSLEPEDIVDGRCDVARNIAREVKEETG ISLSEATAEPGWHAIHMDGTLTVFRVFRLAATAEDIVARVAEHVASDPHPEIDEAVAIREPEPTAHNYPEFIPPILDWLF ARIRGQQMA
Sequences:
>Translated_249_residues MTLLETDRAQWPVEGKIFPVSDIEIEVAAEPHPFHLAEAEKARESWQKEIAVNPHLFDGRMVLQRSVLVADGRIRARAHI VPYSTFLWWRKTRAPGASHIFGMPMLVSSDDALIAIRMGAHTANPGRVYSPGGSLEPEDIVDGRCDVARNIAREVKEETG ISLSEATAEPGWHAIHMDGTLTVFRVFRLAATAEDIVARVAEHVASDPHPEIDEAVAIREPEPTAHNYPEFIPPILDWLF ARIRGQQMA >Mature_248_residues TLLETDRAQWPVEGKIFPVSDIEIEVAAEPHPFHLAEAEKARESWQKEIAVNPHLFDGRMVLQRSVLVADGRIRARAHIV PYSTFLWWRKTRAPGASHIFGMPMLVSSDDALIAIRMGAHTANPGRVYSPGGSLEPEDIVDGRCDVARNIAREVKEETGI SLSEATAEPGWHAIHMDGTLTVFRVFRLAATAEDIVARVAEHVASDPHPEIDEAVAIREPEPTAHNYPEFIPPILDWLFA RIRGQQMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27729; Mature: 27598
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLETDRAQWPVEGKIFPVSDIEIEVAAEPHPFHLAEAEKARESWQKEIAVNPHLFDGR CCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCH MVLQRSVLVADGRIRARAHIVPYSTFLWWRKTRAPGASHIFGMPMLVSSDDALIAIRMGA HHHHHHEEEECCCEEEEEEEEECHHHEEEECCCCCCCCHHCCCCEEEECCCCEEEEEECC HTANPGRVYSPGGSLEPEDIVDGRCDVARNIAREVKEETGISLSEATAEPGWHAIHMDGT CCCCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCEEHHHCCCCCCEEEEECCH LTVFRVFRLAATAEDIVARVAEHVASDPHPEIDEAVAIREPEPTAHNYPEFIPPILDWLF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH ARIRGQQMA HHHCCCCCC >Mature Secondary Structure TLLETDRAQWPVEGKIFPVSDIEIEVAAEPHPFHLAEAEKARESWQKEIAVNPHLFDGR CCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCH MVLQRSVLVADGRIRARAHIVPYSTFLWWRKTRAPGASHIFGMPMLVSSDDALIAIRMGA HHHHHHEEEECCCEEEEEEEEECHHHEEEECCCCCCCCHHCCCCEEEECCCCEEEEEECC HTANPGRVYSPGGSLEPEDIVDGRCDVARNIAREVKEETGISLSEATAEPGWHAIHMDGT CCCCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCEEHHHCCCCCCEEEEECCH LTVFRVFRLAATAEDIVARVAEHVASDPHPEIDEAVAIREPEPTAHNYPEFIPPILDWLF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH ARIRGQQMA HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA