| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397113
Identifier: 150397113
GI number: 150397113
Start: 1972126
End: 1972773
Strand: Reverse
Name: 150397113
Synonym: Smed_1911
Alternate gene names: NA
Gene position: 1972773-1972126 (Counterclockwise)
Preceding gene: 150397115
Following gene: 150397112
Centisome position: 52.16
GC content: 63.12
Gene sequence:
>648_bases ATGAACCAGAACACCTCCAGCGCTGTCATGCAGCAGCGCTCCGAGCCTGACGACAGCCTCGACGACTTCCCGACGCAGCC TTGGGCCACGCGGGCGCTGTGCTTTCACGTCCTCGCCGGATACCGCCTCAGGGATAAGACCTGCTGGGAACCGGCCTGCA ATCGCGGCCACATGGTCGATCCGCTTGCAGAGAGCTTCGGCCAAGTCTGGGCCAGCGACGTTCATAATTACGGGCGGGGA GCTCAGGGTGACTTCCTCATTCCCGGAATGATTCCATGGGATGATGGACGAGGCGTTGACTGGATCGTCACCAACCCGCC TTTCCGACTGGCCGAGCAATTCATCGCCCGGGCCCTAGACGTCGCCACCGTCGGCGTTGCGATGATCGTTCGCACTTCCT TCCTGGAGGGCGTGGGCCGCTACGAGAACCTTTTCAGCAAGAACCCGCCATCGATTGTGGCTCAGTTCTCCGAGCGCGTG CCGATGGTCAAAGGCCGGCTCACGGCGACCGGATCGACCGCCACCTCCTACTGCTGGCTCGTCTGGCTAAACGGCGTCAC GACCACGAAGCTGGTCTGGATCCCGCCGTGCCGGAAGAAGCTCGAGCGCGCTGACGACTACGCGGCCTATCGCGAGGTGA CGGCATGA
Upstream 100 bases:
>100_bases TCAGCCATGTCCACATACCTGCTGTTTCTGGCGGCCTAACCGACTTCCCTCTCAATCGTTCCAGAGCAACTACCGATACT TGCAAGGGGAGGGAGGCAGA
Downstream 100 bases:
>100_bases CAGGTTCAACCGCTCATCTTCGACGGGACTTCCTCGCCGGGCACTGGGGTAATGTCCGGGGCCTCTTCTGGGACAAGGTC AGGTCCCGGCTCCTCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MNQNTSSAVMQQRSEPDDSLDDFPTQPWATRALCFHVLAGYRLRDKTCWEPACNRGHMVDPLAESFGQVWASDVHNYGRG AQGDFLIPGMIPWDDGRGVDWIVTNPPFRLAEQFIARALDVATVGVAMIVRTSFLEGVGRYENLFSKNPPSIVAQFSERV PMVKGRLTATGSTATSYCWLVWLNGVTTTKLVWIPPCRKKLERADDYAAYREVTA
Sequences:
>Translated_215_residues MNQNTSSAVMQQRSEPDDSLDDFPTQPWATRALCFHVLAGYRLRDKTCWEPACNRGHMVDPLAESFGQVWASDVHNYGRG AQGDFLIPGMIPWDDGRGVDWIVTNPPFRLAEQFIARALDVATVGVAMIVRTSFLEGVGRYENLFSKNPPSIVAQFSERV PMVKGRLTATGSTATSYCWLVWLNGVTTTKLVWIPPCRKKLERADDYAAYREVTA >Mature_215_residues MNQNTSSAVMQQRSEPDDSLDDFPTQPWATRALCFHVLAGYRLRDKTCWEPACNRGHMVDPLAESFGQVWASDVHNYGRG AQGDFLIPGMIPWDDGRGVDWIVTNPPFRLAEQFIARALDVATVGVAMIVRTSFLEGVGRYENLFSKNPPSIVAQFSERV PMVKGRLTATGSTATSYCWLVWLNGVTTTKLVWIPPCRKKLERADDYAAYREVTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24077; Mature: 24077
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQNTSSAVMQQRSEPDDSLDDFPTQPWATRALCFHVLAGYRLRDKTCWEPACNRGHMVD CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PLAESFGQVWASDVHNYGRGAQGDFLIPGMIPWDDGRGVDWIVTNPPFRLAEQFIARALD HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH VATVGVAMIVRTSFLEGVGRYENLFSKNPPSIVAQFSERVPMVKGRLTATGSTATSYCWL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCEEEECCCCHHHEEEE VWLNGVTTTKLVWIPPCRKKLERADDYAAYREVTA EEECCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQNTSSAVMQQRSEPDDSLDDFPTQPWATRALCFHVLAGYRLRDKTCWEPACNRGHMVD CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC PLAESFGQVWASDVHNYGRGAQGDFLIPGMIPWDDGRGVDWIVTNPPFRLAEQFIARALD HHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH VATVGVAMIVRTSFLEGVGRYENLFSKNPPSIVAQFSERVPMVKGRLTATGSTATSYCWL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCEEEECCCCHHHEEEE VWLNGVTTTKLVWIPPCRKKLERADDYAAYREVTA EEECCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA