| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397100
Identifier: 150397100
GI number: 150397100
Start: 1964870
End: 1965241
Strand: Direct
Name: 150397100
Synonym: Smed_1898
Alternate gene names: NA
Gene position: 1964870-1965241 (Clockwise)
Preceding gene: 150397091
Following gene: 150397105
Centisome position: 51.95
GC content: 59.14
Gene sequence:
>372_bases GTGAACGTGGCCGGCGCACAGATATCCCCACTGGTCCGCAACTTAATGTGGGAATCCGCTCTAGAGGCGAGCAGGATCGC TTGGGTGCCAGACGCCCCGAGCCGAGGGTCCGTCGTTTTCCTCAACGAGACTTTGGCGCTTGCCCAACGTTTCCGCGACA GGTTCAATCAAAACCATAGGATCTTCCGCGTCGCTCCTGTCGATGACAACGCCAACCGGCACCGAGGCGACGTCGCAATC TTTGAAGACGTTCCCGAACCGCTTTTCACCAGCCTGGCGGAGCGCTGTCGTCTGTATTGGGTTAACCCAGATCCACAGTT CCCTGAGATACTATGGGAAGGCGCCGTCCGGGTTGAGGCCGACGTCGAGTGA
Upstream 100 bases:
>100_bases GTATTTCCACGTGAGCGAAGAAGACTGGCAGGCTGGTGACGTAATCCAGCCAGGAAAATTCGGCAGAAGCATCATCGAGA CCTCTCAACCCTCGATAAAA
Downstream 100 bases:
>100_bases TTGACGTCCCCACCTCTACCCTTACCGGAGGCCTGTGGCCCTCGAGCATGCGCCACTGTTTAGACGGATTCTTTTTGAAC GCTAGAGACCATGGACAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNVAGAQISPLVRNLMWESALEASRIAWVPDAPSRGSVVFLNETLALAQRFRDRFNQNHRIFRVAPVDDNANRHRGDVAI FEDVPEPLFTSLAERCRLYWVNPDPQFPEILWEGAVRVEADVE
Sequences:
>Translated_123_residues MNVAGAQISPLVRNLMWESALEASRIAWVPDAPSRGSVVFLNETLALAQRFRDRFNQNHRIFRVAPVDDNANRHRGDVAI FEDVPEPLFTSLAERCRLYWVNPDPQFPEILWEGAVRVEADVE >Mature_123_residues MNVAGAQISPLVRNLMWESALEASRIAWVPDAPSRGSVVFLNETLALAQRFRDRFNQNHRIFRVAPVDDNANRHRGDVAI FEDVPEPLFTSLAERCRLYWVNPDPQFPEILWEGAVRVEADVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14072; Mature: 14072
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVAGAQISPLVRNLMWESALEASRIAWVPDAPSRGSVVFLNETLALAQRFRDRFNQNHR CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCE IFRVAPVDDNANRHRGDVAIFEDVPEPLFTSLAERCRLYWVNPDPQFPEILWEGAVRVEA EEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHCEEEEECCCCCCHHHHHCCCEEEEE DVE CCC >Mature Secondary Structure MNVAGAQISPLVRNLMWESALEASRIAWVPDAPSRGSVVFLNETLALAQRFRDRFNQNHR CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCE IFRVAPVDDNANRHRGDVAIFEDVPEPLFTSLAERCRLYWVNPDPQFPEILWEGAVRVEA EEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHHCEEEEECCCCCCHHHHHCCCEEEEE DVE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA