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The map label for this gene is 150397099

Identifier: 150397099

GI number: 150397099

Start: 1964247

End: 1964747

Strand: Reverse

Name: 150397099

Synonym: Smed_1897

Alternate gene names: NA

Gene position: 1964747-1964247 (Counterclockwise)

Preceding gene: 150397101

Following gene: 150397098

Centisome position: 51.95

GC content: 56.89

Gene sequence:

>501_bases
ATGCCCATCCTGAAAAACGCACGGCACGAGAAGTTCGCGCAGGCCCGCGCGAAAGGCAATACAGTCGATGAGGCGTATGT
CGTCGCCGGCTTCAAAGCCAACAGAGGAAATGCAGCACGTTTGAATGCAAATGAAAGCATTCAAGAGCGCGTAGCCGAAA
TCCAGGGTAAGGGCGCTCTCAAGGCGGAAGCGACCGTTGAACGTGTTCTGAAAGAGCTGTCTCGTATCGGCTTCTCCGAT
CTTCGCCGCGTGTTCGATGCGAACGGCAGGCTGCTTCGACCCGAAGAGTGGGATGATGACACAGCCGCAGCAGTCGCTTC
GGTCGAAGTGGTGATCCGCAACACCGGCGACGGTGAGGTCGAGCACGTCCACAAGATTAAGGTCTGGGACAAGAACAGCG
CCTTGGAGAAGCTCGCCAAGCACCTCGGTATGTTCATCGAGCGTGTCGAGCACTCTGGGAGCATGAGCCTCAATGTCTTG
CCAGAGGATGCCGAACTGTGA

Upstream 100 bases:

>100_bases
TCGATGATGCTTCTGCCGAATTTTCCTGGCTGGATTACGTCACCAGCCTGCCAGTCTTCTTCGCTCACGTGGAAATACAT
TGTCGCCTCAAGGTTAGCTC

Downstream 100 bases:

>100_bases
CGCATGCAGGTAGCTCGATTAACGGAGAAACAGCGAGAGGCTAATCGCCTCCTTGCCGGCCCGGCGCGCAACATCATGCT
CCGCGGCGGGTCTCGTTCCG

Product: phage terminase small subunit

Products: NA

Alternate protein names: Terminase Small Subunit

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPILKNARHEKFAQARAKGNTVDEAYVVAGFKANRGNAARLNANESIQERVAEIQGKGALKAEATVERVLKELSRIGFSD
LRRVFDANGRLLRPEEWDDDTAAAVASVEVVIRNTGDGEVEHVHKIKVWDKNSALEKLAKHLGMFIERVEHSGSMSLNVL
PEDAEL

Sequences:

>Translated_166_residues
MPILKNARHEKFAQARAKGNTVDEAYVVAGFKANRGNAARLNANESIQERVAEIQGKGALKAEATVERVLKELSRIGFSD
LRRVFDANGRLLRPEEWDDDTAAAVASVEVVIRNTGDGEVEHVHKIKVWDKNSALEKLAKHLGMFIERVEHSGSMSLNVL
PEDAEL
>Mature_165_residues
PILKNARHEKFAQARAKGNTVDEAYVVAGFKANRGNAARLNANESIQERVAEIQGKGALKAEATVERVLKELSRIGFSDL
RRVFDANGRLLRPEEWDDDTAAAVASVEVVIRNTGDGEVEHVHKIKVWDKNSALEKLAKHLGMFIERVEHSGSMSLNVLP
EDAEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18369; Mature: 18238

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILKNARHEKFAQARAKGNTVDEAYVVAGFKANRGNAARLNANESIQERVAEIQGKGAL
CCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCC
KAEATVERVLKELSRIGFSDLRRVFDANGRLLRPEEWDDDTAAAVASVEVVIRNTGDGEV
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHEEEEECCCCCCE
EHVHKIKVWDKNSALEKLAKHLGMFIERVEHSGSMSLNVLPEDAEL
EEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure 
PILKNARHEKFAQARAKGNTVDEAYVVAGFKANRGNAARLNANESIQERVAEIQGKGAL
CCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCC
KAEATVERVLKELSRIGFSDLRRVFDANGRLLRPEEWDDDTAAAVASVEVVIRNTGDGEV
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHEEEEECCCCCCE
EHVHKIKVWDKNSALEKLAKHLGMFIERVEHSGSMSLNVLPEDAEL
EEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA