Click here to switch to the map view.

The map label for this gene is 150397079

Identifier: 150397079

GI number: 150397079

Start: 1948991

End: 1949581

Strand: Reverse

Name: 150397079

Synonym: Smed_1877

Alternate gene names: NA

Gene position: 1949581-1948991 (Counterclockwise)

Preceding gene: 150397080

Following gene: 150397077

Centisome position: 51.55

GC content: 60.24

Gene sequence:

>591_bases
ATGAGTGTGTTGGATCCAGCTGTCGAGAGTGCGCTCGAGACCGGCCGCCTTGCACGGCTCGACCTCATCCGCTTCGATTT
ACCCGGCAAGACCGTCGGCTACCATCGTGGTGGGAGGCCCTACACCTATAACGGTCTGACCTATCTTCCGAACCGATTTC
TCGAGCCGGGCGAACTGGTCAGCGCCGTCGGCGTCGCCGTGACGACGCGGACTATCGTCTTCTCAAACATCCCAGTTAGC
AACCCCGAGGACGCAGTCTCTCAGATTGAGCAATATAACTATCAAAATGCTCCGATGATCATCTCCCATCTGGCGGGAGA
TCCCGAAACGGACGCGGTCCTCGGGATTCTCGCCTCATCAATCTACGAGATCGACCAGGTGCGCTACAACGAGGGTGCGG
TCTCCGGTTCCGAACGAACGCTGACGATGATGATCGATCTGCAACCGCCGGGACGATCGGCGCGCGGCTCGACCGGCGTC
AAGCGCTCGCAGGCCGAGCAGCAGTTCGACAATAATCCGACCGACACGGGCCTCGAGTTCGTGGCGACGAATGCGACCAT
CCCCGAGGAATGGGGCCAGGTGAGCCGATAG

Upstream 100 bases:

>100_bases
AGCCGTCGTGTGTCATGAGTATTGATCCGGGCAGTGTGGCGGCACCGAAATCGTGGGCGGGTCGCGAAGCCTCATTTTCC
GCTACGGAGATGTTTTTCTC

Downstream 100 bases:

>100_bases
GAGTTCCTTCGATGAAAAACGTAATAGCAGTAGATTACACGTCCTCAGGGCGTGCGCCGCACGAATGTCCCGGAGACGCC
ACCAAAGACTGAACACGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSVLDPAVESALETGRLARLDLIRFDLPGKTVGYHRGGRPYTYNGLTYLPNRFLEPGELVSAVGVAVTTRTIVFSNIPVS
NPEDAVSQIEQYNYQNAPMIISHLAGDPETDAVLGILASSIYEIDQVRYNEGAVSGSERTLTMMIDLQPPGRSARGSTGV
KRSQAEQQFDNNPTDTGLEFVATNATIPEEWGQVSR

Sequences:

>Translated_196_residues
MSVLDPAVESALETGRLARLDLIRFDLPGKTVGYHRGGRPYTYNGLTYLPNRFLEPGELVSAVGVAVTTRTIVFSNIPVS
NPEDAVSQIEQYNYQNAPMIISHLAGDPETDAVLGILASSIYEIDQVRYNEGAVSGSERTLTMMIDLQPPGRSARGSTGV
KRSQAEQQFDNNPTDTGLEFVATNATIPEEWGQVSR
>Mature_195_residues
SVLDPAVESALETGRLARLDLIRFDLPGKTVGYHRGGRPYTYNGLTYLPNRFLEPGELVSAVGVAVTTRTIVFSNIPVSN
PEDAVSQIEQYNYQNAPMIISHLAGDPETDAVLGILASSIYEIDQVRYNEGAVSGSERTLTMMIDLQPPGRSARGSTGVK
RSQAEQQFDNNPTDTGLEFVATNATIPEEWGQVSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21347; Mature: 21216

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLDPAVESALETGRLARLDLIRFDLPGKTVGYHRGGRPYTYNGLTYLPNRFLEPGELV
CCCCCHHHHHHHHCCCEEEEEEEEECCCCCEECCCCCCCCEEECCHHHCCHHCCCHHHHH
SAVGVAVTTRTIVFSNIPVSNPEDAVSQIEQYNYQNAPMIISHLAGDPETDAVLGILASS
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
IYEIDQVRYNEGAVSGSERTLTMMIDLQPPGRSARGSTGVKRSQAEQQFDNNPTDTGLEF
HHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEE
VATNATIPEEWGQVSR
EEECCCCCHHHCCCCC
>Mature Secondary Structure 
SVLDPAVESALETGRLARLDLIRFDLPGKTVGYHRGGRPYTYNGLTYLPNRFLEPGELV
CCCCHHHHHHHHCCCEEEEEEEEECCCCCEECCCCCCCCEEECCHHHCCHHCCCHHHHH
SAVGVAVTTRTIVFSNIPVSNPEDAVSQIEQYNYQNAPMIISHLAGDPETDAVLGILASS
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
IYEIDQVRYNEGAVSGSERTLTMMIDLQPPGRSARGSTGVKRSQAEQQFDNNPTDTGLEF
HHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEE
VATNATIPEEWGQVSR
EEECCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA