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The map label for this gene is 150397065

Identifier: 150397065

GI number: 150397065

Start: 1936118

End: 1936855

Strand: Direct

Name: 150397065

Synonym: Smed_1863

Alternate gene names: NA

Gene position: 1936118-1936855 (Clockwise)

Preceding gene: 150397064

Following gene: 150397066

Centisome position: 51.19

GC content: 57.32

Gene sequence:

>738_bases
ATGATAACCGCCTCTCCACTCAATGGGCGAATGCCATTAACCGCCTTAATGTTCGTTTTTGTTTGCGGACTATCGATGCC
GGCGCGCGCGGCTGAAGTCATTGATCACGACCAGGTGAAAGGGTTTCCCGACAGCACCTCGGGTCTCCTCAAGACCTTTC
AGCCCTCTCTCAAAGTTATCCGAGGCTGCGTCCCTTTCCCGGCCGTGGATGCCGACGGCAACGTCAGCGGCGGTCTGAAG
CCATCAGGAATGGCGAGCGGCGGTTGCTCACGCAGCCCTGGACAGATCTATGTCAGAGCTGGGGAGTATAACGGTCAGTG
TGCCGTCATGTACTCGTGGTTCTTTCCCAAGGACCAGAACCAGACCTGGCCCCTCAAGGGCGGGTCTCGGTATGATTGGG
AGGATGTCATCGTATGGCTGACGCGTTGCGATAGCGAAGCGCAGGTTGAAGCGGTCAGCTATTGGAGCGGTGGTCGTTAC
AACGTGACGCCACAGCCGCACATGGATGGAACACATCCGCTGGTCAAATACTACCGGCCGGAAGGCGGAAACCAATTTTT
ACTCGCGGACACCCGGTACCGTGGCGGCAAGCAGCCTGCAGTCAGCTGGTCCGACCTGACCGAGGAAGCAAGGGAAACGC
TCGACAACTATAACTTCGGCAAAGTGGCTGTGCCATTCAACTCTTACAACTTCGACGCCAATCTGGAGACGGCCTGGCGA
CAAGGACATGGAGGCTGA

Upstream 100 bases:

>100_bases
GACCAAGCACCACTTTTGCACGATCTAGCCCCCGGGCGTGCATGCCGTTGTGACATTCATGTTGCGGACCAAAATGGTTC
AAAACAACAAAGGAGACAAG

Downstream 100 bases:

>100_bases
TTGGGGAATTCCTGGGCCGGAAACGGTGGTGCTCAAAGGCTCCGCCGTGACCGCTCCGCGACCGCACGACAATCGGCAGG
TGTTGGACAATGTCTACCGC

Product: necrosis-inducing protein

Products: NA

Alternate protein names: Necrosis-Inducing Protein; Necrosis And Ethylene Inducing Protein; Necrosis Inducing Factor; Necrosis Inducing

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MITASPLNGRMPLTALMFVFVCGLSMPARAAEVIDHDQVKGFPDSTSGLLKTFQPSLKVIRGCVPFPAVDADGNVSGGLK
PSGMASGGCSRSPGQIYVRAGEYNGQCAVMYSWFFPKDQNQTWPLKGGSRYDWEDVIVWLTRCDSEAQVEAVSYWSGGRY
NVTPQPHMDGTHPLVKYYRPEGGNQFLLADTRYRGGKQPAVSWSDLTEEARETLDNYNFGKVAVPFNSYNFDANLETAWR
QGHGG

Sequences:

>Translated_245_residues
MITASPLNGRMPLTALMFVFVCGLSMPARAAEVIDHDQVKGFPDSTSGLLKTFQPSLKVIRGCVPFPAVDADGNVSGGLK
PSGMASGGCSRSPGQIYVRAGEYNGQCAVMYSWFFPKDQNQTWPLKGGSRYDWEDVIVWLTRCDSEAQVEAVSYWSGGRY
NVTPQPHMDGTHPLVKYYRPEGGNQFLLADTRYRGGKQPAVSWSDLTEEARETLDNYNFGKVAVPFNSYNFDANLETAWR
QGHGG
>Mature_245_residues
MITASPLNGRMPLTALMFVFVCGLSMPARAAEVIDHDQVKGFPDSTSGLLKTFQPSLKVIRGCVPFPAVDADGNVSGGLK
PSGMASGGCSRSPGQIYVRAGEYNGQCAVMYSWFFPKDQNQTWPLKGGSRYDWEDVIVWLTRCDSEAQVEAVSYWSGGRY
NVTPQPHMDGTHPLVKYYRPEGGNQFLLADTRYRGGKQPAVSWSDLTEEARETLDNYNFGKVAVPFNSYNFDANLETAWR
QGHGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26981; Mature: 26981

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITASPLNGRMPLTALMFVFVCGLSMPARAAEVIDHDQVKGFPDSTSGLLKTFQPSLKVI
CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RGCVPFPAVDADGNVSGGLKPSGMASGGCSRSPGQIYVRAGEYNGQCAVMYSWFFPKDQN
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC
QTWPLKGGSRYDWEDVIVWLTRCDSEAQVEAVSYWSGGRYNVTPQPHMDGTHPLVKYYRP
CEECCCCCCCCCHHHHEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCEEEEECC
EGGNQFLLADTRYRGGKQPAVSWSDLTEEARETLDNYNFGKVAVPFNSYNFDANLETAWR
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHH
QGHGG
CCCCC
>Mature Secondary Structure
MITASPLNGRMPLTALMFVFVCGLSMPARAAEVIDHDQVKGFPDSTSGLLKTFQPSLKVI
CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RGCVPFPAVDADGNVSGGLKPSGMASGGCSRSPGQIYVRAGEYNGQCAVMYSWFFPKDQN
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC
QTWPLKGGSRYDWEDVIVWLTRCDSEAQVEAVSYWSGGRYNVTPQPHMDGTHPLVKYYRP
CEECCCCCCCCCHHHHEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCEEEEECC
EGGNQFLLADTRYRGGKQPAVSWSDLTEEARETLDNYNFGKVAVPFNSYNFDANLETAWR
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHH
QGHGG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA