| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397053
Identifier: 150397053
GI number: 150397053
Start: 1926367
End: 1926501
Strand: Direct
Name: 150397053
Synonym: Smed_1850
Alternate gene names: NA
Gene position: 1926367-1926501 (Clockwise)
Preceding gene: 150397052
Following gene: 150397057
Centisome position: 50.94
GC content: 56.3
Gene sequence:
>135_bases ATGACAGTTTCCCTGCTTTCGGCAGGGCAGGCTTCGGTGTGGAACAAGCGCCGCAAGCATGCCGGTATCATCGTGATGCT CTTGTCTTTCGCTGAAGGATGCGCAAGTTATTCGCGCCGGCAGTTTCCGGCATGA
Upstream 100 bases:
>100_bases AAAACTCGAAAAGACCGACCGCATCCAAGGCGGCATCCAGACGTCGTTCGTCACGGAGCGGTTCGGTCCCATATACTCCG TCGAGTGACCCGTTTGTCGG
Downstream 100 bases:
>100_bases CACGACGATCGAGGACCCCTGCGTTGAAATCAGAAGACAAGCCTGACGCCGAATTCAGGGTCGAAAAGCGAACGAACGGG CGCTGGGCTTTCGTGCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 43
Protein sequence:
>44_residues MTVSLLSAGQASVWNKRRKHAGIIVMLLSFAEGCASYSRRQFPA
Sequences:
>Translated_44_residues MTVSLLSAGQASVWNKRRKHAGIIVMLLSFAEGCASYSRRQFPA >Mature_43_residues TVSLLSAGQASVWNKRRKHAGIIVMLLSFAEGCASYSRRQFPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4840; Mature: 4709
Theoretical pI: Translated: 11.51; Mature: 11.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSLLSAGQASVWNKRRKHAGIIVMLLSFAEGCASYSRRQFPA CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVSLLSAGQASVWNKRRKHAGIIVMLLSFAEGCASYSRRQFPA CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA