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The map label for this gene is dnaC [C]

Identifier: 150397049

GI number: 150397049

Start: 1922170

End: 1922970

Strand: Reverse

Name: dnaC [C]

Synonym: Smed_1846

Alternate gene names: 150397049

Gene position: 1922970-1922170 (Counterclockwise)

Preceding gene: 150397050

Following gene: 150397048

Centisome position: 50.85

GC content: 62.05

Gene sequence:

>801_bases
ATGACGAACGTGGATCATGACGTGCTGATCGCAACGCTCGATCGGCTGAAGCTGACGGCGATCCGCGACCAGCTCGACAC
GTTGCTGGACGAGGCGGCTCGTTCGAAGATGACCTTGCGCGAGGCGCTGGCTTTCCTTGTGTCGCGCGAGATTGCCCGGC
GCGACGAGCGGCGGATATCGATGTCGAGCAAGCTGGCGCAGTTCCCGTTCGTGCGCGAATTGGACGGCTTCGACTTCGAG
GCGCAGCCCTCGCTGGATCAGGGGCAGATCAGGGAGCTTGCGACCTGCCGCTGGATCGCTCACGGTGATACCGTACTCTT
CCTTGGACCGCCCGGTACAGGCAAGACGCATCTGGCTGTGGGCCTCGGCCGCGAGGCCATCCGCCAGAATTACAACGTCC
AGTTCGTCACGGCGGCCACGCTAGTGGCGATGCTGGCGAAGGCTCACAACGACGGCTCGCTCGACAAACAGTTGACGATC
CTGTCGCGGCCGAAATTGCTGATCATCGACGAGCTGGGTTACTTGCCCTTCGAGGCCAATGCCGCCCACCTGTTCTTCCA
ACTGGTGTCTCGGCGCTACGAGAAGGGCTCGATCCTGATCACCTCAAACCGTTCCGTGGGCGAATGGGGAAGTGTTTTTG
GCGACCCTGTCGTCGCCACGGCGATATTGGACCGCCTGCTTCACCACTCGACGGTGATCACCATCCGGGGCGACAGCTAT
CGGCTTCGCGAAAAGCGCCGCTCCGGCCTTCTGCAGAAAGCCGGAGCGGCGCTCCAACCCAACGAAACCGCAAACCAATG
A

Upstream 100 bases:

>100_bases
CCGAGGGTCTGGTGCGAGCCGCCGCTCCCATCGAGCTCCCCCCTCCCACCCTGTTGCGCCCGCTTGCGGAATACGAGGCG
GTTGCCGGAGGAGGCTGGTG

Downstream 100 bases:

>100_bases
GGGGGTCAGTTCTTCAATTCGCCAAAGGGGTCAATTCCTCGATTCGCTTGACACATGGGACTGCCTTATCCTGTGATGCG
AGGTCCGCTGTGACGGCCTC

Product: IstB ATP binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MTNVDHDVLIATLDRLKLTAIRDQLDTLLDEAARSKMTLREALAFLVSREIARRDERRISMSSKLAQFPFVRELDGFDFE
AQPSLDQGQIRELATCRWIAHGDTVLFLGPPGTGKTHLAVGLGREAIRQNYNVQFVTAATLVAMLAKAHNDGSLDKQLTI
LSRPKLLIIDELGYLPFEANAAHLFFQLVSRRYEKGSILITSNRSVGEWGSVFGDPVVATAILDRLLHHSTVITIRGDSY
RLREKRRSGLLQKAGAALQPNETANQ

Sequences:

>Translated_266_residues
MTNVDHDVLIATLDRLKLTAIRDQLDTLLDEAARSKMTLREALAFLVSREIARRDERRISMSSKLAQFPFVRELDGFDFE
AQPSLDQGQIRELATCRWIAHGDTVLFLGPPGTGKTHLAVGLGREAIRQNYNVQFVTAATLVAMLAKAHNDGSLDKQLTI
LSRPKLLIIDELGYLPFEANAAHLFFQLVSRRYEKGSILITSNRSVGEWGSVFGDPVVATAILDRLLHHSTVITIRGDSY
RLREKRRSGLLQKAGAALQPNETANQ
>Mature_265_residues
TNVDHDVLIATLDRLKLTAIRDQLDTLLDEAARSKMTLREALAFLVSREIARRDERRISMSSKLAQFPFVRELDGFDFEA
QPSLDQGQIRELATCRWIAHGDTVLFLGPPGTGKTHLAVGLGREAIRQNYNVQFVTAATLVAMLAKAHNDGSLDKQLTIL
SRPKLLIIDELGYLPFEANAAHLFFQLVSRRYEKGSILITSNRSVGEWGSVFGDPVVATAILDRLLHHSTVITIRGDSYR
LREKRRSGLLQKAGAALQPNETANQ

Specific function: This Protein Is Required For Chromosomal Replication. It Forms, In Concert With DNAb Protein And Other Prepriming Proteins DNAt, N, N', N'' A Prepriming Protein Complex On The Specific Site Of The Template DNA Recognized By Protein N'. [C]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 29644; Mature: 29513

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVDHDVLIATLDRLKLTAIRDQLDTLLDEAARSKMTLREALAFLVSREIARRDERRIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSSKLAQFPFVRELDGFDFEAQPSLDQGQIRELATCRWIAHGDTVLFLGPPGTGKTHLAV
HHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEEEEECCCCCCCEEEEE
GLGREAIRQNYNVQFVTAATLVAMLAKAHNDGSLDKQLTILSRPKLLIIDELGYLPFEAN
CCCHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCC
AAHLFFQLVSRRYEKGSILITSNRSVGEWGSVFGDPVVATAILDRLLHHSTVITIRGDSY
HHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCH
RLREKRRSGLLQKAGAALQPNETANQ
HHHHHHHHCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TNVDHDVLIATLDRLKLTAIRDQLDTLLDEAARSKMTLREALAFLVSREIARRDERRIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSSKLAQFPFVRELDGFDFEAQPSLDQGQIRELATCRWIAHGDTVLFLGPPGTGKTHLAV
HHHHHHHCCCHHHCCCCCCCCCCCCCHHHHHHHHHHEEEECCCEEEEECCCCCCCEEEEE
GLGREAIRQNYNVQFVTAATLVAMLAKAHNDGSLDKQLTILSRPKLLIIDELGYLPFEAN
CCCHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCC
AAHLFFQLVSRRYEKGSILITSNRSVGEWGSVFGDPVVATAILDRLLHHSTVITIRGDSY
HHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCH
RLREKRRSGLLQKAGAALQPNETANQ
HHHHHHHHCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]