Click here to switch to the map view.

The map label for this gene is 150397046

Identifier: 150397046

GI number: 150397046

Start: 1919969

End: 1920349

Strand: Reverse

Name: 150397046

Synonym: Smed_1843

Alternate gene names: NA

Gene position: 1920349-1919969 (Counterclockwise)

Preceding gene: 150397048

Following gene: 150397044

Centisome position: 50.78

GC content: 66.67

Gene sequence:

>381_bases
ATGTCCAAAGATCAAAGCGCCATGTCGGATATCGCGGCGCGGGCCGAAGCGGCGGCGAGGTCTTCCTCTGCGGGCCTGGC
GCCCGCGGGGTCGCGCGACCCCTTGGGGAGCAGCTTTCTTTGCGCCGTGCAGGCGGATTTCGCACAGCATGGCGTCGGCG
TGCTTGCCCGCATTCGCGAGGAGAAGCCGGAAACCTATCTGAAGCTCGTCTCGTCGATCCTGCCGAAGGATCTGAGTGCC
GCAACCGGCTGCGCGGACGAGCTGTCCGACGAACAGCTCATCGAGCGCATCCAGGCCCTGGATGCGGCGATCCGGCCCTT
AATCTCCGGCAAGAAGAGGGCAGGCGGCATGCGGAAGCGCCCGCCGCCCGCAAGGGCATAG

Upstream 100 bases:

>100_bases
AGATTTTGGCGCAATTAGGGGTAGCAGTAAAATTGGAGTACACGCCTCACAAGACGAGCCGTTGCGCAAGGGAAGCGATG
AAGACAAGCGGGAGAGCGTA

Downstream 100 bases:

>100_bases
CATCAATGGGTCGGCGCCACCCTTGCCGAAACAGGCGCTTCGCTGCTCGAGAAGATGATGACGGCAAAGAGCAGAACGCC
GGCAAAGGCAATGAGCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSKDQSAMSDIAARAEAAARSSSAGLAPAGSRDPLGSSFLCAVQADFAQHGVGVLARIREEKPETYLKLVSSILPKDLSA
ATGCADELSDEQLIERIQALDAAIRPLISGKKRAGGMRKRPPPARA

Sequences:

>Translated_126_residues
MSKDQSAMSDIAARAEAAARSSSAGLAPAGSRDPLGSSFLCAVQADFAQHGVGVLARIREEKPETYLKLVSSILPKDLSA
ATGCADELSDEQLIERIQALDAAIRPLISGKKRAGGMRKRPPPARA
>Mature_125_residues
SKDQSAMSDIAARAEAAARSSSAGLAPAGSRDPLGSSFLCAVQADFAQHGVGVLARIREEKPETYLKLVSSILPKDLSAA
TGCADELSDEQLIERIQALDAAIRPLISGKKRAGGMRKRPPPARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13186; Mature: 13055

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDQSAMSDIAARAEAAARSSSAGLAPAGSRDPLGSSFLCAVQADFAQHGVGVLARIRE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EKPETYLKLVSSILPKDLSAATGCADELSDEQLIERIQALDAAIRPLISGKKRAGGMRKR
CCHHHHHHHHHHHCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PPPARA
CCCCCC
>Mature Secondary Structure 
SKDQSAMSDIAARAEAAARSSSAGLAPAGSRDPLGSSFLCAVQADFAQHGVGVLARIRE
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EKPETYLKLVSSILPKDLSAATGCADELSDEQLIERIQALDAAIRPLISGKKRAGGMRKR
CCHHHHHHHHHHHCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PPPARA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA