Click here to switch to the map view.

The map label for this gene is 150397024

Identifier: 150397024

GI number: 150397024

Start: 1902370

End: 1903731

Strand: Reverse

Name: 150397024

Synonym: Smed_1821

Alternate gene names: NA

Gene position: 1903731-1902370 (Counterclockwise)

Preceding gene: 150397025

Following gene: 150397023

Centisome position: 50.34

GC content: 60.35

Gene sequence:

>1362_bases
ATGAGCGAAGCCAGGAAGAAGCAGATCGTTTCCATGATCCTCGGCGGCATGCCGCCGCAGCCGGGAGGCGCAGGGGGAGC
GCGGCAATTTGCCGTCGACATTCCCTACGGCTCTCCGTCGCGGGCGGCGGCCACTGCTTTCTCCGGAGAAGACCTGGCGG
CGATGCCGCGAAGCCTCAGCGGCGGTGCCGTGTTGCGCACCTATCATCCGACGCTGCGCGATCAACTTGCCGACTGGATT
CTCGGAGACGGACGCCCCTCCGTCTATAAGCGCCGGCTTGTGACTGATCTTATAGGGTCGGCGGGTCTGGGCGGTGAGGG
GCTCTCCGGCATTGACTTCACGCCGCTAGGCATGGGTTTTGCGGCGGAAGAGACGGGACGTTCCGTTGCGGATGGCAATT
ACGGCGAGGCGGTTATCGAGGCGTTGGGGATGTTGCCGGCACCGGCACTCCGCGCGGCTGTGAAAGGCGGGCGTTCGGCG
ATCGCAGGAGCAGATACTGTCATGGCGCCCCCGGTCGACAAGGCGCTGGGCATGACGGCAGAGAAGACGCAGGACGCTGG
TTTTCTTGCCTCTCGCAGCGCACGAATATATGATCCTCCAGTCAAACAGCCTCGGCCATTCGAGGCTGATTACAGGCCGG
GAGATCCACGACATGAAGCAGCGGGAGGCATTGCGGACGAAAGCGGAAGACTCCGCCTGGACATGGACGGAAGACCGCTT
ACCGCAAGATATGTCGCCGGTAGAACGGTCGTTGGCGGAGGCGATACCGGCCTATCAGCGGAAGCATATGACGAAATCGG
AAAGGCAGGAACGGGCGGACGCCCTAAGGCGGTTGCGAAGAGTGCGATCGCAGGCGATGCGGGACGGTACGTGGTCGACA
GAGATCGACGATCAGGGGACGTACTGAGTCAAGATATCTTTTACGATAAATCCCTGCCGGCAGACAAAGCCGGGCGCGTT
GTCGCGCATGAGCTTGCACATGCAATCGATGCCATTGCCGGCAAAATGCCAACTGATGGTATCGATAAAGAACTTCGAAC
CATCTACAACGACCTGAACAACCCACAGAGCTATGGCAAGAGGTTTGGCCCCGAGCAGAATAAGTACTGGGGCGAACATG
TGCGCAATGAGCTGGTGGCTGAGGCGATCCGGGCCTATATGGCCGCTCCGAACTATATCAAGACAGTTGCGCCGAAGGCA
GCAGCCCGCATCCGCCAGTATGTCAATACCCATCCGAAGCTGAAAAATACCATACAGTTCAACAGCATCGGCGGTTTTGG
CGTTACCGGGATTGCCGCCGGGACCAACGGCCTTGCCGGATACGGCGCCAACGGACAAAGGACGCGGGAGGGCGAGCTAT
GA

Upstream 100 bases:

>100_bases
CCGCGCAGCAGCTGATGATGCTCGCAATAAGCGGGCTCAGGATCGAAGACGAGCGCAGCCGCTGGGGCAATGCGCAGACA
GTCGTCGGGGGAGTAACGCC

Downstream 100 bases:

>100_bases
CCTTGCTTACCGCAATCAACCAGGTCTGCGACGTCGTCTCGCTCTCGCCTTTCGATAACGTGTATGGGTCCGCCGAGCCT
AACGCGATGACGATGGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MSEARKKQIVSMILGGMPPQPGGAGGARQFAVDIPYGSPSRAAATAFSGEDLAAMPRSLSGGAVLRTYHPTLRDQLADWI
LGDGRPSVYKRRLVTDLIGSAGLGGEGLSGIDFTPLGMGFAAEETGRSVADGNYGEAVIEALGMLPAPALRAAVKGGRSA
IAGADTVMAPPVDKALGMTAEKTQDAGFLASRSARIYDPPVKQPRPFEADYRPGDPRHEAAGGIADESGRLRLDMDGRPL
TARYVAGRTVVGGGDTGLSAEAYDEIGKAGTGGRPKAVAKSAIAGDAGRYVVDRDRRSGDVLSQDIFYDKSLPADKAGRV
VAHELAHAIDAIAGKMPTDGIDKELRTIYNDLNNPQSYGKRFGPEQNKYWGEHVRNELVAEAIRAYMAAPNYIKTVAPKA
AARIRQYVNTHPKLKNTIQFNSIGGFGVTGIAAGTNGLAGYGANGQRTREGEL

Sequences:

>Translated_453_residues
MSEARKKQIVSMILGGMPPQPGGAGGARQFAVDIPYGSPSRAAATAFSGEDLAAMPRSLSGGAVLRTYHPTLRDQLADWI
LGDGRPSVYKRRLVTDLIGSAGLGGEGLSGIDFTPLGMGFAAEETGRSVADGNYGEAVIEALGMLPAPALRAAVKGGRSA
IAGADTVMAPPVDKALGMTAEKTQDAGFLASRSARIYDPPVKQPRPFEADYRPGDPRHEAAGGIADESGRLRLDMDGRPL
TARYVAGRTVVGGGDTGLSAEAYDEIGKAGTGGRPKAVAKSAIAGDAGRYVVDRDRRSGDVLSQDIFYDKSLPADKAGRV
VAHELAHAIDAIAGKMPTDGIDKELRTIYNDLNNPQSYGKRFGPEQNKYWGEHVRNELVAEAIRAYMAAPNYIKTVAPKA
AARIRQYVNTHPKLKNTIQFNSIGGFGVTGIAAGTNGLAGYGANGQRTREGEL
>Mature_452_residues
SEARKKQIVSMILGGMPPQPGGAGGARQFAVDIPYGSPSRAAATAFSGEDLAAMPRSLSGGAVLRTYHPTLRDQLADWIL
GDGRPSVYKRRLVTDLIGSAGLGGEGLSGIDFTPLGMGFAAEETGRSVADGNYGEAVIEALGMLPAPALRAAVKGGRSAI
AGADTVMAPPVDKALGMTAEKTQDAGFLASRSARIYDPPVKQPRPFEADYRPGDPRHEAAGGIADESGRLRLDMDGRPLT
ARYVAGRTVVGGGDTGLSAEAYDEIGKAGTGGRPKAVAKSAIAGDAGRYVVDRDRRSGDVLSQDIFYDKSLPADKAGRVV
AHELAHAIDAIAGKMPTDGIDKELRTIYNDLNNPQSYGKRFGPEQNKYWGEHVRNELVAEAIRAYMAAPNYIKTVAPKAA
ARIRQYVNTHPKLKNTIQFNSIGGFGVTGIAAGTNGLAGYGANGQRTREGEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47551; Mature: 47420

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEARKKQIVSMILGGMPPQPGGAGGARQFAVDIPYGSPSRAAATAFSGEDLAAMPRSLS
CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCHHHCCCCCC
GGAVLRTYHPTLRDQLADWILGDGRPSVYKRRLVTDLIGSAGLGGEGLSGIDFTPLGMGF
CCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AAEETGRSVADGNYGEAVIEALGMLPAPALRAAVKGGRSAIAGADTVMAPPVDKALGMTA
CHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCCCCCCHHHHHCCCH
EKTQDAGFLASRSARIYDPPVKQPRPFEADYRPGDPRHEAAGGIADESGRLRLDMDGRPL
HHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCE
TARYVAGRTVVGGGDTGLSAEAYDEIGKAGTGGRPKAVAKSAIAGDAGRYVVDRDRRSGD
EEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCC
VLSQDIFYDKSLPADKAGRVVAHELAHAIDAIAGKMPTDGIDKELRTIYNDLNNPQSYGK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH
RFGPEQNKYWGEHVRNELVAEAIRAYMAAPNYIKTVAPKAAARIRQYVNTHPKLKNTIQF
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHCCCCHHCEEEE
NSIGGFGVTGIAAGTNGLAGYGANGQRTREGEL
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEARKKQIVSMILGGMPPQPGGAGGARQFAVDIPYGSPSRAAATAFSGEDLAAMPRSLS
CHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCHHHCCCCCC
GGAVLRTYHPTLRDQLADWILGDGRPSVYKRRLVTDLIGSAGLGGEGLSGIDFTPLGMGF
CCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AAEETGRSVADGNYGEAVIEALGMLPAPALRAAVKGGRSAIAGADTVMAPPVDKALGMTA
CHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCCCCCCHHHHHCCCH
EKTQDAGFLASRSARIYDPPVKQPRPFEADYRPGDPRHEAAGGIADESGRLRLDMDGRPL
HHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCE
TARYVAGRTVVGGGDTGLSAEAYDEIGKAGTGGRPKAVAKSAIAGDAGRYVVDRDRRSGD
EEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCC
VLSQDIFYDKSLPADKAGRVVAHELAHAIDAIAGKMPTDGIDKELRTIYNDLNNPQSYGK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH
RFGPEQNKYWGEHVRNELVAEAIRAYMAAPNYIKTVAPKAAARIRQYVNTHPKLKNTIQF
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHCCCCHHCEEEE
NSIGGFGVTGIAAGTNGLAGYGANGQRTREGEL
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA