Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150397014

Identifier: 150397014

GI number: 150397014

Start: 1893332

End: 1893493

Strand: Reverse

Name: 150397014

Synonym: Smed_1811

Alternate gene names: NA

Gene position: 1893493-1893332 (Counterclockwise)

Preceding gene: 150397016

Following gene: 150397013

Centisome position: 50.07

GC content: 53.09

Gene sequence:

>162_bases
ATGTTTTTCAAATTCGATTCGAAGGGATGTGCGAAAATCGAGGCGACCCGCAACGATAAGGTGCCGATGGCCTTGGTATT
CTCGGTTGCCAAGGCGCCTCGCAACCTTGTAAACGTGCGCGGGAGTTCTCTAACACCCCTGGATGCTCATGCAGGTTCGT
GA

Upstream 100 bases:

>100_bases
TCGATTTATCTTAGCGAGGTAACTTTTTGTCACATTAAATGAAAAAACTTCCTGTTATAAGCCTGACACTGTCAGGTTTT
TGCCGGAAAAGTTCACCACT

Downstream 100 bases:

>100_bases
TTTTTTCCGCTTGTGGCTTTGGGTCCGGTCGCGCGGGCGCATTTCAATCGGCCCCAAATGTCGTATCGAGCGCGGGGCTG
TTCTGGATTTACGTGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MFFKFDSKGCAKIEATRNDKVPMALVFSVAKAPRNLVNVRGSSLTPLDAHAGS

Sequences:

>Translated_53_residues
MFFKFDSKGCAKIEATRNDKVPMALVFSVAKAPRNLVNVRGSSLTPLDAHAGS
>Mature_53_residues
MFFKFDSKGCAKIEATRNDKVPMALVFSVAKAPRNLVNVRGSSLTPLDAHAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5695; Mature: 5695

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFKFDSKGCAKIEATRNDKVPMALVFSVAKAPRNLVNVRGSSLTPLDAHAGS
CEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MFFKFDSKGCAKIEATRNDKVPMALVFSVAKAPRNLVNVRGSSLTPLDAHAGS
CEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA