| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
Click here to switch to the map view.
The map label for this gene is 150397012
Identifier: 150397012
GI number: 150397012
Start: 1892013
End: 1892714
Strand: Reverse
Name: 150397012
Synonym: Smed_1809
Alternate gene names: NA
Gene position: 1892714-1892013 (Counterclockwise)
Preceding gene: 150397013
Following gene: 150397011
Centisome position: 50.05
GC content: 49.72
Gene sequence:
>702_bases ATGAAAAGGCTCGCACGCTCATTGCGCAAGAAGTATCGCTATCTCGTGGACGCCAGGACCGTCACAATTGATGGCGTTAC TCTTATTTCGGACAAAGGACGGATACCGCACTATCTCCGGGATTTGATGTACCGCGAAGTGTATGAGGACACAGAGCGAA ACGTTCTCCTAAAGATATTAAAGCCGGGGCACAGAGTTGTGGAGTTCGGCACCGGTCTCGGGTTTATTTCGCTCTTGGCA GCAAAAATTTGTGGTCCAGAAAAGGTCAACACTTACGAGGCCAATCCCACTATCGAGGCTCTTATCCGAGAGAACTTCCA ACTCAACCGCGTTAATCCTTGCCTTCACATGGCTGCTGTGACACGTGACGGTCGCCGGTTATTATTCAACGCTTCGGACA ACATCATTTCGTCAAGCGCTTTCGACCGGGGGATTAGCGGAAAAATGATAGAGATCGAAAGCATACCTTTCGCCGATGTC TTGCGAAGCCATTCACCGGACGTGTTGGTTATGGACGTCGAGGGTGGCGAGCATGAGCTGCTGATGTCGGATGGTCTGGC TGCGATCAGACATATTCTCGTGGAGCTCCACCCGCATATCATCGGTCAGGAGAAGGTGGATGAAATCAGAAACCATCTTG TTTCCAAGGGATTTGTTGCCGAAACCCAAGACAGAAAGACGTTTCATTTTCATAGGATCTAA
Upstream 100 bases:
>100_bases ACGAGGGAGGTCGCGCAATGAGAAATTTGCTTCTGAGTGTCGTCCGAAATGACGCTTCCACTTTGGACAGTCACGCTAGC AACGCCACCTTGAGGGCGCG
Downstream 100 bases:
>100_bases CAGGCTAACGGTCCAGCTAACCGTTCGCCCCCGTCACCCGGTCGGCGACGACGCGCGTTTCCTCTTGTCGCCAGCAATTG CCGTTGACCGCTGCGACGGC
Product: FkbM family methyltransferase
Products: NA
Alternate protein names: Methyltransferase FkbM Family; Methyltransferase FkbM; Methyltransferase FkbM Family Protein; GSCFA Family
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKRLARSLRKKYRYLVDARTVTIDGVTLISDKGRIPHYLRDLMYREVYEDTERNVLLKILKPGHRVVEFGTGLGFISLLA AKICGPEKVNTYEANPTIEALIRENFQLNRVNPCLHMAAVTRDGRRLLFNASDNIISSSAFDRGISGKMIEIESIPFADV LRSHSPDVLVMDVEGGEHELLMSDGLAAIRHILVELHPHIIGQEKVDEIRNHLVSKGFVAETQDRKTFHFHRI
Sequences:
>Translated_233_residues MKRLARSLRKKYRYLVDARTVTIDGVTLISDKGRIPHYLRDLMYREVYEDTERNVLLKILKPGHRVVEFGTGLGFISLLA AKICGPEKVNTYEANPTIEALIRENFQLNRVNPCLHMAAVTRDGRRLLFNASDNIISSSAFDRGISGKMIEIESIPFADV LRSHSPDVLVMDVEGGEHELLMSDGLAAIRHILVELHPHIIGQEKVDEIRNHLVSKGFVAETQDRKTFHFHRI >Mature_233_residues MKRLARSLRKKYRYLVDARTVTIDGVTLISDKGRIPHYLRDLMYREVYEDTERNVLLKILKPGHRVVEFGTGLGFISLLA AKICGPEKVNTYEANPTIEALIRENFQLNRVNPCLHMAAVTRDGRRLLFNASDNIISSSAFDRGISGKMIEIESIPFADV LRSHSPDVLVMDVEGGEHELLMSDGLAAIRHILVELHPHIIGQEKVDEIRNHLVSKGFVAETQDRKTFHFHRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26507; Mature: 26507
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLARSLRKKYRYLVDARTVTIDGVTLISDKGRIPHYLRDLMYREVYEDTERNVLLKIL CHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEC KPGHRVVEFGTGLGFISLLAAKICGPEKVNTYEANPTIEALIRENFQLNRVNPCLHMAAV CCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCCCHHHHHHHH TRDGRRLLFNASDNIISSSAFDRGISGKMIEIESIPFADVLRSHSPDVLVMDVEGGEHEL CCCCCEEEEECCCCHHCCHHHCCCCCCCEEEEECCCHHHHHHCCCCCEEEEECCCCCEEE LMSDGLAAIRHILVELHPHIIGQEKVDEIRNHLVSKGFVAETQDRKTFHFHRI EHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCEEEECC >Mature Secondary Structure MKRLARSLRKKYRYLVDARTVTIDGVTLISDKGRIPHYLRDLMYREVYEDTERNVLLKIL CHHHHHHHHHHHHHHHHCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEC KPGHRVVEFGTGLGFISLLAAKICGPEKVNTYEANPTIEALIRENFQLNRVNPCLHMAAV CCCCEEEEECCCHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCCCCHHHHHHHH TRDGRRLLFNASDNIISSSAFDRGISGKMIEIESIPFADVLRSHSPDVLVMDVEGGEHEL CCCCCEEEEECCCCHHCCHHHCCCCCCCEEEEECCCHHHHHHCCCCCEEEEECCCCCEEE LMSDGLAAIRHILVELHPHIIGQEKVDEIRNHLVSKGFVAETQDRKTFHFHRI EHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA