Click here to switch to the map view.

The map label for this gene is yjbE [H]

Identifier: 150397002

GI number: 150397002

Start: 1882263

End: 1882901

Strand: Direct

Name: yjbE [H]

Synonym: Smed_1799

Alternate gene names: 150397002

Gene position: 1882263-1882901 (Clockwise)

Preceding gene: 150397000

Following gene: 150397007

Centisome position: 49.77

GC content: 61.19

Gene sequence:

>639_bases
ATGGAGATTTTCACTTCCGCCGGCCTGACGGCGTTGCTGCAGGTCATTGTGATCGACCTGGTGCTCGCCGGCGACAATGC
GGTCGTCATCGGCCTTGCCGCAGCCGGCTTGCCGCTGGAGCAACGCAAGAAGGCCATTCTCGTCGGCATTCTCGCCGCCA
CCGTGCTTCGCATTGTGCTCGCCATCTTCACGGTCCAGCTTCTTGCAATCATCGGACTTCTGCTTGCCGGTGGCCTCCTT
CTGCTTTGGGTCTGCTGGAAGATGTGGCGCGAGCTTCGCTCAGGCGGGCACGAACTTGGCGACCTCGAGAACGCGGACAA
TTCGGGCCCTAGAAAGACTTTCAGACAGGCGGCAACCCAGATCGTCATCGCAGATGTCTCCATGTCGCTCGACAACGTTC
TTGCCGTCGCCGGGGCCGCCCGCGAGCATCCAACCGTGCTCGTCTTTGGTCTTGCGCTCTCCATCGCAATGATGGGTATC
GCCGCGAGCTTCATCGCGCGTCTGCTCGGCCGCTATCACTGGATCGCTTATATCGGTCTGGCGATCATTCTCTACGTCGC
TCTTGATATGATCTACCGCGGCGCGCTGGAGGTCTGGCCACATGTCGTGCCGGTGGCGCAGGCGCTGGCTGGTCTCTAG

Upstream 100 bases:

>100_bases
AAAACCTATTAGTTGTCCCGGCCCACTTGATCCGTCGATTGTTCACGGTCTATGCGTTTTCGACGCCGCCGGCGTCTCGG
TACAAAAAGGGTTACCAGAT

Downstream 100 bases:

>100_bases
ATCACGTCTGTAAGCTGAGCCGCGTGCAAACAAGAGGCGGCTGGCCGGATCCAGGCCGGATGTGCAGGGAGAAGCGGCAT
TACCGCTCCTCCCTCACTCT

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MEIFTSAGLTALLQVIVIDLVLAGDNAVVIGLAAAGLPLEQRKKAILVGILAATVLRIVLAIFTVQLLAIIGLLLAGGLL
LLWVCWKMWRELRSGGHELGDLENADNSGPRKTFRQAATQIVIADVSMSLDNVLAVAGAAREHPTVLVFGLALSIAMMGI
AASFIARLLGRYHWIAYIGLAIILYVALDMIYRGALEVWPHVVPVAQALAGL

Sequences:

>Translated_212_residues
MEIFTSAGLTALLQVIVIDLVLAGDNAVVIGLAAAGLPLEQRKKAILVGILAATVLRIVLAIFTVQLLAIIGLLLAGGLL
LLWVCWKMWRELRSGGHELGDLENADNSGPRKTFRQAATQIVIADVSMSLDNVLAVAGAAREHPTVLVFGLALSIAMMGI
AASFIARLLGRYHWIAYIGLAIILYVALDMIYRGALEVWPHVVPVAQALAGL
>Mature_212_residues
MEIFTSAGLTALLQVIVIDLVLAGDNAVVIGLAAAGLPLEQRKKAILVGILAATVLRIVLAIFTVQLLAIIGLLLAGGLL
LLWVCWKMWRELRSGGHELGDLENADNSGPRKTFRQAATQIVIADVSMSLDNVLAVAGAAREHPTVLVFGLALSIAMMGI
AASFIARLLGRYHWIAYIGLAIILYVALDMIYRGALEVWPHVVPVAQALAGL

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI1788119, Length=202, Percent_Identity=31.6831683168317, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022301 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 22550; Mature: 22550

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFTSAGLTALLQVIVIDLVLAGDNAVVIGLAAAGLPLEQRKKAILVGILAATVLRIVL
CCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AIFTVQLLAIIGLLLAGGLLLLWVCWKMWRELRSGGHELGDLENADNSGPRKTFRQAATQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
IVIADVSMSLDNVLAVAGAAREHPTVLVFGLALSIAMMGIAASFIARLLGRYHWIAYIGL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIILYVALDMIYRGALEVWPHVVPVAQALAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIFTSAGLTALLQVIVIDLVLAGDNAVVIGLAAAGLPLEQRKKAILVGILAATVLRIVL
CCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AIFTVQLLAIIGLLLAGGLLLLWVCWKMWRELRSGGHELGDLENADNSGPRKTFRQAATQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
IVIADVSMSLDNVLAVAGAAREHPTVLVFGLALSIAMMGIAASFIARLLGRYHWIAYIGL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIILYVALDMIYRGALEVWPHVVPVAQALAGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]