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The map label for this gene is yigE [H]

Identifier: 150396976

GI number: 150396976

Start: 1858023

End: 1858775

Strand: Reverse

Name: yigE [H]

Synonym: Smed_1773

Alternate gene names: 150396976

Gene position: 1858775-1858023 (Counterclockwise)

Preceding gene: 150396977

Following gene: 150396975

Centisome position: 49.15

GC content: 61.75

Gene sequence:

>753_bases
ATGCCACTGTTTTCAAGAGCTTTCATCGCTGGCGCCGCACTTCTGTCCGCCGGCATCGCTGCGCCCGCATCGGCTGCCTG
CCGCGATGTCCGCCATCTCGGCGAAGCCTACATCGCGTGCTCGTTCGACCCTCAGACAAACGATTTACGGATCTACAACA
AGGATCGGGCGGGGGTACCGTTCAGCTCATTCAGAGCCCTGTCGCTCGAACTCCGTCGTCGCGGCCAGTATCTCATCTTT
GCGATGAACGGCGGGATGTACCAAGAAGACCTCTCTCCAGTCGGTCTGCATGTGGAGGAGGGCACGGAGCAGACGCCGCT
TAACACAAATCCCGGTTGGGGCAATTTTCACATGCTGCCGAACGGCGTCTTTCATGTCGACGGCGGCAAGGCCGGTGTCA
TTGCGGCGGAGGCCTATCGGCTCGCGGGCATCAAGCCGCGTTTCGCCACGCAATCCGGCCCGATGCTCGTCGTCGACGGC
GCGCTCCATCCGCGCTTCCTTCCGGATAGTGACAGCCTCAGGACACGCAACGGCGTCGGGGTCGCCACGAACGGCAAGGT
GGTTTTCGCCGCGTCGAAACGGCCCGTACGCTTCCACGACTTCGCCACGCTGTTCCGCGATGCGCTCGATTGTCCCAATG
CGCTCTTTCTGGACGGAACGATCTCGAGCCTCTACGCGCCTGAGATCAACCGTCACGACCGGCTTTTTCCGCTCGGGCCA
ATTATCGCGGTGGTTGCCGATTTTCCGCGGTGA

Upstream 100 bases:

>100_bases
TGGCGGCGCTCAAGCCGTGAACGGCAAGCGCGGGCGGGTCACATCAATCCGCCGCAATCCGAGCGATGCTGCACCAGGAG
ATTCCCTTCAGGTCTAGTCG

Downstream 100 bases:

>100_bases
GCTGACGAGCCCGAGTGCACAGGCGTTGGGGTGGTCGGTATGCGAAGGGTTTGATCCATCGAAAGTTGCGGTGCACTGAC
ATCCGGCGGGGTGGTTTCGG

Product: lipoprotein signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MPLFSRAFIAGAALLSAGIAAPASAACRDVRHLGEAYIACSFDPQTNDLRIYNKDRAGVPFSSFRALSLELRRRGQYLIF
AMNGGMYQEDLSPVGLHVEEGTEQTPLNTNPGWGNFHMLPNGVFHVDGGKAGVIAAEAYRLAGIKPRFATQSGPMLVVDG
ALHPRFLPDSDSLRTRNGVGVATNGKVVFAASKRPVRFHDFATLFRDALDCPNALFLDGTISSLYAPEINRHDRLFPLGP
IIAVVADFPR

Sequences:

>Translated_250_residues
MPLFSRAFIAGAALLSAGIAAPASAACRDVRHLGEAYIACSFDPQTNDLRIYNKDRAGVPFSSFRALSLELRRRGQYLIF
AMNGGMYQEDLSPVGLHVEEGTEQTPLNTNPGWGNFHMLPNGVFHVDGGKAGVIAAEAYRLAGIKPRFATQSGPMLVVDG
ALHPRFLPDSDSLRTRNGVGVATNGKVVFAASKRPVRFHDFATLFRDALDCPNALFLDGTISSLYAPEINRHDRLFPLGP
IIAVVADFPR
>Mature_249_residues
PLFSRAFIAGAALLSAGIAAPASAACRDVRHLGEAYIACSFDPQTNDLRIYNKDRAGVPFSSFRALSLELRRRGQYLIFA
MNGGMYQEDLSPVGLHVEEGTEQTPLNTNPGWGNFHMLPNGVFHVDGGKAGVIAAEAYRLAGIKPRFATQSGPMLVVDGA
LHPRFLPDSDSLRTRNGVGVATNGKVVFAASKRPVRFHDFATLFRDALDCPNALFLDGTISSLYAPEINRHDRLFPLGPI
IAVVADFPR

Specific function: Unknown

COG id: COG3698

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994975, Length=187, Percent_Identity=38.5026737967914, Blast_Score=147, Evalue=6e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018711 [H]

Pfam domain/function: PF09992 DUF2233 [H]

EC number: NA

Molecular weight: Translated: 27083; Mature: 26952

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLFSRAFIAGAALLSAGIAAPASAACRDVRHLGEAYIACSFDPQTNDLRIYNKDRAGVP
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCC
FSSFRALSLELRRRGQYLIFAMNGGMYQEDLSPVGLHVEEGTEQTPLNTNPGWGNFHMLP
HHHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCEEEECC
NGVFHVDGGKAGVIAAEAYRLAGIKPRFATQSGPMLVVDGALHPRFLPDSDSLRTRNGVG
CCEEEECCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCE
VATNGKVVFAASKRPVRFHDFATLFRDALDCPNALFLDGTISSLYAPEINRHDRLFPLGP
EEECCEEEEEECCCCEEHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCHHH
IIAVVADFPR
HHHHHCCCCC
>Mature Secondary Structure 
PLFSRAFIAGAALLSAGIAAPASAACRDVRHLGEAYIACSFDPQTNDLRIYNKDRAGVP
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCC
FSSFRALSLELRRRGQYLIFAMNGGMYQEDLSPVGLHVEEGTEQTPLNTNPGWGNFHMLP
HHHHHHHHHHHHCCCCEEEEEECCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCEEEECC
NGVFHVDGGKAGVIAAEAYRLAGIKPRFATQSGPMLVVDGALHPRFLPDSDSLRTRNGVG
CCEEEECCCCCEEEEEHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCE
VATNGKVVFAASKRPVRFHDFATLFRDALDCPNALFLDGTISSLYAPEINRHDRLFPLGP
EEECCEEEEEECCCCEEHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCCCCCCCCHHH
IIAVVADFPR
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1379743; 9278503 [H]