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The map label for this gene is cobE [H]

Identifier: 150396950

GI number: 150396950

Start: 1827095

End: 1827532

Strand: Reverse

Name: cobE [H]

Synonym: Smed_1747

Alternate gene names: 150396950

Gene position: 1827532-1827095 (Counterclockwise)

Preceding gene: 150396952

Following gene: 150396949

Centisome position: 48.32

GC content: 65.07

Gene sequence:

>438_bases
ATGCCTTCCGCCGAAGGAATGACCCTCGTTACCGCAAAGCTCGTGATGGGCCTTGGATGTGAACGCGACACGGCGCCCGA
AGAGGTGATCGCGCTTGCAGAGCAGGCTCTCGCGCACGCCGGTGTCTCCGGCCGGGCTGTCGCGCTTGTGGCCTCGCTGG
ACGCACGCGCCGAGGAGCCGGCGATCCACGCGGTCGCGCGGCATTTTTCCGTGCCGCCGCGTTTCTTCGACGCTGCCACG
CTGGAGGCGCAATCGCCACGTCTAAAAAATCCGTCAAAAGTGGTCTTTGCTCATACGGGCTGCCACGGTGTTGCCGAGGG
GGCGGCTCTGTCGGGTGCGGGATCTGATGCGGTGCTGCTCGTACCTAAGATCCGCTCGGCTCGGGCAACGGTGGCAATCG
CCGGACCGGCTGACTTTGCAAGGGGAACCCTGCGATGA

Upstream 100 bases:

>100_bases
TCAGGGGGCTTTACCCGGTGCTGTCCAGACCGGTATGAGGCATCTCGCCACGCGCCGGCGCTTCGTATGAACGCCGACGC
TGCAGGGAGCCACACCGCAT

Downstream 100 bases:

>100_bases
CGCTGGCTCAAACACGGACTTCCTTTAACCAGCCGATTCAATTGTCTGTGGCAGTTTCCTTCATACTGACTTTAAGTTCT
TGCTCGGTCCGACCATATGG

Product: putative cobalamin biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPSAEGMTLVTAKLVMGLGCERDTAPEEVIALAEQALAHAGVSGRAVALVASLDARAEEPAIHAVARHFSVPPRFFDAAT
LEAQSPRLKNPSKVVFAHTGCHGVAEGAALSGAGSDAVLLVPKIRSARATVAIAGPADFARGTLR

Sequences:

>Translated_145_residues
MPSAEGMTLVTAKLVMGLGCERDTAPEEVIALAEQALAHAGVSGRAVALVASLDARAEEPAIHAVARHFSVPPRFFDAAT
LEAQSPRLKNPSKVVFAHTGCHGVAEGAALSGAGSDAVLLVPKIRSARATVAIAGPADFARGTLR
>Mature_144_residues
PSAEGMTLVTAKLVMGLGCERDTAPEEVIALAEQALAHAGVSGRAVALVASLDARAEEPAIHAVARHFSVPPRFFDAATL
EAQSPRLKNPSKVVFAHTGCHGVAEGAALSGAGSDAVLLVPKIRSARATVAIAGPADFARGTLR

Specific function: Unknown

COG id: COG2073

COG function: function code H; Cobalamin biosynthesis protein CbiG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002750 [H]

Pfam domain/function: PF01890 CbiG [H]

EC number: NA

Molecular weight: Translated: 14787; Mature: 14656

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAEGMTLVTAKLVMGLGCERDTAPEEVIALAEQALAHAGVSGRAVALVASLDARAEEP
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH
AIHAVARHFSVPPRFFDAATLEAQSPRLKNPSKVVFAHTGCHGVAEGAALSGAGSDAVLL
HHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCEEEE
VPKIRSARATVAIAGPADFARGTLR
EECCCCCCEEEEEECCHHHCCCCCC
>Mature Secondary Structure 
PSAEGMTLVTAKLVMGLGCERDTAPEEVIALAEQALAHAGVSGRAVALVASLDARAEEP
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH
AIHAVARHFSVPPRFFDAATLEAQSPRLKNPSKVVFAHTGCHGVAEGAALSGAGSDAVLL
HHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCEEEE
VPKIRSARATVAIAGPADFARGTLR
EECCCCCCEEEEEECCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2211520 [H]