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The map label for this gene is fnrN [H]

Identifier: 150396945

GI number: 150396945

Start: 1822067

End: 1822795

Strand: Direct

Name: fnrN [H]

Synonym: Smed_1742

Alternate gene names: 150396945

Gene position: 1822067-1822795 (Clockwise)

Preceding gene: 150396938

Following gene: 150396951

Centisome position: 48.18

GC content: 61.18

Gene sequence:

>729_bases
ATGACCCAACCAAACCAAAAAAATTCCCATTCGGAGATCCCGATCGCATGTGTCGCCTGCCATGCCCGCGAAGGCGGCGT
TTGCGGCACGCTCTCGCCGAGCCAACTCGCCCAAGTCGTCCGTAAAACCGCGCGGCGCCGCGTTCAACCGCAGATCGAAA
TAATTGGACAGGGCGACGGAATAGAGCATTGCGCGGCAATCGTTCGCGGAGTCGTGAAGCTGAGCAAGATGCTGGCGGAC
GGCCGTCAGCAGATTGTCGGGCTGCAATTCGCCCCCGATTTCCTGGGCACGCCCTTCCTTCGCGAGTGCTCGCTCAGCGC
CGAAGCGGTCACGAACGTCGACCTCTGTGTCTTTCCGCGTGCGCTGATCGAGCGATTGGCCGCCGAGGCACCCGATCTGC
AACGCCGCCTGCACGTGGAAACGCTGAAGAAATTATGCGCGGCGCGCGACTGGATGCTGACCCTCGGGCGCAAGACGGCG
AAAGAGAGGGTCGCGAATTTCCTCTATCTCGTTGCCACGCGCATCAACTTCGAGGACGGCCCCGCAAGGGAATTCGACCT
GCCTCTCTCCCGCGCCGATATCGCCGACTACCTCGGCCTGACCATTGAGACTGTCAGCCGCCAGATTACCAGACTGCGCA
AGGAAGGCGTGATCCGCGTCGAAAACAGGCGCCGCATCATTGTGCCGGATATCCGCCGGCTGATGAAGAATGCCAGCATC
GACAGTTGA

Upstream 100 bases:

>100_bases
CGGCATATCGTTTCGCGCTTCGCATCAGAGCAGCCCGGCAAGTCTCCCTTCGGCTGTCTTTGCGCCGGACAAACGAGGAG
GAACATAGAAATTGCAGATC

Downstream 100 bases:

>100_bases
GTGCATCCGTAAGCGTCATCATTGCAGGCAGCAGGCCACGACGGCACTCGGATCGCTATAGAGCCGCCAGAAGCAGAAAA
CCGAAGGCAAAGGCAGACGT

Product: CRP/FNR family transcriptional regulator

Products: NA

Alternate protein names: ORF-240 [H]

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTQPNQKNSHSEIPIACVACHAREGGVCGTLSPSQLAQVVRKTARRRVQPQIEIIGQGDGIEHCAAIVRGVVKLSKMLAD
GRQQIVGLQFAPDFLGTPFLRECSLSAEAVTNVDLCVFPRALIERLAAEAPDLQRRLHVETLKKLCAARDWMLTLGRKTA
KERVANFLYLVATRINFEDGPAREFDLPLSRADIADYLGLTIETVSRQITRLRKEGVIRVENRRRIIVPDIRRLMKNASI
DS

Sequences:

>Translated_242_residues
MTQPNQKNSHSEIPIACVACHAREGGVCGTLSPSQLAQVVRKTARRRVQPQIEIIGQGDGIEHCAAIVRGVVKLSKMLAD
GRQQIVGLQFAPDFLGTPFLRECSLSAEAVTNVDLCVFPRALIERLAAEAPDLQRRLHVETLKKLCAARDWMLTLGRKTA
KERVANFLYLVATRINFEDGPAREFDLPLSRADIADYLGLTIETVSRQITRLRKEGVIRVENRRRIIVPDIRRLMKNASI
DS
>Mature_241_residues
TQPNQKNSHSEIPIACVACHAREGGVCGTLSPSQLAQVVRKTARRRVQPQIEIIGQGDGIEHCAAIVRGVVKLSKMLADG
RQQIVGLQFAPDFLGTPFLRECSLSAEAVTNVDLCVFPRALIERLAAEAPDLQRRLHVETLKKLCAARDWMLTLGRKTAK
ERVANFLYLVATRINFEDGPAREFDLPLSRADIADYLGLTIETVSRQITRLRKEGVIRVENRRRIIVPDIRRLMKNASID
S

Specific function: Promotes the microaerobic and symbiotic induction of fixN, possibly by binding to the FNR consensus binding site upstream of fixN [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787595, Length=212, Percent_Identity=28.3018867924528, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 27003; Mature: 26872

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS50042 CNMP_BINDING_3 ; PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPNQKNSHSEIPIACVACHAREGGVCGTLSPSQLAQVVRKTARRRVQPQIEIIGQGDG
CCCCCCCCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
IEHCAAIVRGVVKLSKMLADGRQQIVGLQFAPDFLGTPFLRECSLSAEAVTNVDLCVFPR
HHHHHHHHHHHHHHHHHHHHHHHHHEECEECCHHHCCCHHHHHCCCHHHHCCCHHHHHHH
ALIERLAAEAPDLQRRLHVETLKKLCAARDWMLTLGRKTAKERVANFLYLVATRINFEDG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PAREFDLPLSRADIADYLGLTIETVSRQITRLRKEGVIRVENRRRIIVPDIRRLMKNASI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECHHHHHHHHHCCC
DS
CC
>Mature Secondary Structure 
TQPNQKNSHSEIPIACVACHAREGGVCGTLSPSQLAQVVRKTARRRVQPQIEIIGQGDG
CCCCCCCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
IEHCAAIVRGVVKLSKMLADGRQQIVGLQFAPDFLGTPFLRECSLSAEAVTNVDLCVFPR
HHHHHHHHHHHHHHHHHHHHHHHHHEECEECCHHHCCCHHHHHCCCHHHHCCCHHHHHHH
ALIERLAAEAPDLQRRLHVETLKKLCAARDWMLTLGRKTAKERVANFLYLVATRINFEDG
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PAREFDLPLSRADIADYLGLTIETVSRQITRLRKEGVIRVENRRRIIVPDIRRLMKNASI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECHHHHHHHHHCCC
DS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2175385 [H]